Gene Patl_2201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2201 
Symbol 
ID4172353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2660222 
End bp2660593 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content47% 
IMG OID638055209 
Producthypothetical protein 
Protein accessionYP_661773 
Protein GI109898518 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.414248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTT ATCTCATCGT AGGCACCGCG AGTGCGATGC TTGCGGTTAT ACTGGGGGCA 
TTCGCCGCCC ACGGATTAAA AAACCAACTG TCTGAGAGCC TGATTGGGGT CTTTCAAACG
GGCGTTCAGT ATCAAATGTA CCATAGCCTA GGGCTTATTT TATTGGTACT TACGGCTCAG
TTGATGCCGA GTCCGCAGCT AGTGTGGTCA GCGGGTTTTA TGAGCGCAGG CATAGTGTTA
TTCAGTGGTA GTTTATATTT ATTGGCCATC ACAGGGATTA AATGGTTTGG ACCAGTCACG
CCGTTAGGGG GGCTGTGCTT TATCATCGCG TGGGCGTTAT TCATTTATGC AGCAGTTAAA
GGGTTAAAAT AG
 
Protein sequence
MKIYLIVGTA SAMLAVILGA FAAHGLKNQL SESLIGVFQT GVQYQMYHSL GLILLVLTAQ 
LMPSPQLVWS AGFMSAGIVL FSGSLYLLAI TGIKWFGPVT PLGGLCFIIA WALFIYAAVK
GLK