Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2198 |
Symbol | |
ID | 4172350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2656797 |
End bp | 2658446 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055206 |
Product | phosphoglucomutase |
Protein accession | YP_661770 |
Protein GI | 109898515 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0033] Phosphoglucomutase |
TIGRFAM ID | [TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.225859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATTC ACTCAGAAGC AGGTAAACCA GCGTCACAAG CGCAACTTGT AAACGTTGCG CAATTAATTA GTGCCTATTA CAGCAATAAA CCTGATAAAA GTGACATCAG TCAAGGTGTT ACTTTTGGTA CATCAGGGCA TCGCGGAAGT GCGTTTAAAA ACACCTTCAC TGATACTCAC ATTGCAGCGA TTAGTCAGGC ATTAGCAGAA TATCGACAAG CCAATAGTAT TACAGGTCCC ATGTATGTGG GGATGGATAC ACATGCGCTT TCTGAAGCTG CTTTTACCAC TGCCATAGAA GTACTCGCAG CAAACGGGGT CAAGCTGGTT GTTCAGCAAG ACCGAGGCTA TACGCCAACG CCCGTGATAA GCCATGCAAT TCTTGATTAT AATGAGGGCA AAGAGTCCGG TTTAAGTGAC GGTGTGGTCA TTACACCTTC CCATAACCCA CCCGAAGATG GGGGATTCAA ATATAACCCT CCTCATGGTG GTCCTGCTGA CAGTGATGTG ACCAATCAAA TTCAAGCCCG CGCTAATGAA CTCATTCATA ACGATCTTCT GGATGTGAAG CGCATGTCTT ATCAGGCAGC TTATGACACC GGCCTAGTCG AAGAAGTTGA TTTCTCTGAT AACTATATCG AGCAGTTAGA TCAAGTCATC GATATGAAAG CCATTGCACA AGCAGGGTTA ACTCTGGGTA CAGATCCCCT AGGCGGTGCA GGTTTACATT ACTGGGATAA GATTGCTAAA CGATACGATT TGAGCATCGA AGTGGTAAAT CGAAAAGTCG ATCATCAATT TGGTTTTATG CGCAGAGATA AAGATGGCAA GATACGGATG GACTGCTCCT CACCTTATGC AATGGCTGGC TTAATTGATC TTAAAGATCG TTTTGATTTA GCGTTTGGTA ATGATCCCGA TTTCGATCGT CACGGTATAG TGACAAAAAC CAATGGCTTG ATGAATCCTA ATCATTATCT GGCGGTTGCC ATTGAGTATC TTTATGCTCA TCGTCCGGAT TGGCCCACAG GACTAAAGGT CGGTAAGACC TTGGTTTCAA GCAGTATGAT TGACCGCGTC GCTCATGATG CCAATCTCAC CGTGGCAGAA ATGCCAGTCG GGTTTAAGTG GTTTGTTCAA GGTCTGCTGA AAAGTGAAAT TGGTTTTGCT GGCGAGGAAA GTGCCGGCGG TATCTTTTTG CGTCGTAATG GTAAGCCATG GGCAACCGAC AAAGACGGCA TCATTTTATG TTTATTGGCT GCAGAAATTC TTGCTGTTAC GGGCAAAGAC CCAAGTGAAC ATTACCAAGC TTTCACCAAA AAATTCGGTG CACCTTTATA TACGCGTATT GATGTTGCTG CGACTCACGC ACAGAAACAG GCGTTAAGCA AAGCGGACAA AAATGCAATT ACGTCCACTG AATTAGCTGG TGAACCAATT GTGTCCATTC AAACCCATGC ATCGGGGAAT AACGCCGCGA TCGGCGGGGT GAAAGTGGCG ACTGAAAATG GTTGGTTTGC TGCACGACCT TCAGGCACTG AAGAAATTTA TAAAATTTAC GCAGAAAGCT TTAATGGTGA AAAACATTTA CAGCTTTTGA TCAAAGAAGC ACAAAATCTG GTGGCGCGTA TATTTGTAAG CGTGAAGTAG
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Protein sequence | MAIHSEAGKP ASQAQLVNVA QLISAYYSNK PDKSDISQGV TFGTSGHRGS AFKNTFTDTH IAAISQALAE YRQANSITGP MYVGMDTHAL SEAAFTTAIE VLAANGVKLV VQQDRGYTPT PVISHAILDY NEGKESGLSD GVVITPSHNP PEDGGFKYNP PHGGPADSDV TNQIQARANE LIHNDLLDVK RMSYQAAYDT GLVEEVDFSD NYIEQLDQVI DMKAIAQAGL TLGTDPLGGA GLHYWDKIAK RYDLSIEVVN RKVDHQFGFM RRDKDGKIRM DCSSPYAMAG LIDLKDRFDL AFGNDPDFDR HGIVTKTNGL MNPNHYLAVA IEYLYAHRPD WPTGLKVGKT LVSSSMIDRV AHDANLTVAE MPVGFKWFVQ GLLKSEIGFA GEESAGGIFL RRNGKPWATD KDGIILCLLA AEILAVTGKD PSEHYQAFTK KFGAPLYTRI DVAATHAQKQ ALSKADKNAI TSTELAGEPI VSIQTHASGN NAAIGGVKVA TENGWFAARP SGTEEIYKIY AESFNGEKHL QLLIKEAQNL VARIFVSVK
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