Gene Patl_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2198 
Symbol 
ID4172350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2656797 
End bp2658446 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content45% 
IMG OID638055206 
Productphosphoglucomutase 
Protein accessionYP_661770 
Protein GI109898515 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.225859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTC ACTCAGAAGC AGGTAAACCA GCGTCACAAG CGCAACTTGT AAACGTTGCG 
CAATTAATTA GTGCCTATTA CAGCAATAAA CCTGATAAAA GTGACATCAG TCAAGGTGTT
ACTTTTGGTA CATCAGGGCA TCGCGGAAGT GCGTTTAAAA ACACCTTCAC TGATACTCAC
ATTGCAGCGA TTAGTCAGGC ATTAGCAGAA TATCGACAAG CCAATAGTAT TACAGGTCCC
ATGTATGTGG GGATGGATAC ACATGCGCTT TCTGAAGCTG CTTTTACCAC TGCCATAGAA
GTACTCGCAG CAAACGGGGT CAAGCTGGTT GTTCAGCAAG ACCGAGGCTA TACGCCAACG
CCCGTGATAA GCCATGCAAT TCTTGATTAT AATGAGGGCA AAGAGTCCGG TTTAAGTGAC
GGTGTGGTCA TTACACCTTC CCATAACCCA CCCGAAGATG GGGGATTCAA ATATAACCCT
CCTCATGGTG GTCCTGCTGA CAGTGATGTG ACCAATCAAA TTCAAGCCCG CGCTAATGAA
CTCATTCATA ACGATCTTCT GGATGTGAAG CGCATGTCTT ATCAGGCAGC TTATGACACC
GGCCTAGTCG AAGAAGTTGA TTTCTCTGAT AACTATATCG AGCAGTTAGA TCAAGTCATC
GATATGAAAG CCATTGCACA AGCAGGGTTA ACTCTGGGTA CAGATCCCCT AGGCGGTGCA
GGTTTACATT ACTGGGATAA GATTGCTAAA CGATACGATT TGAGCATCGA AGTGGTAAAT
CGAAAAGTCG ATCATCAATT TGGTTTTATG CGCAGAGATA AAGATGGCAA GATACGGATG
GACTGCTCCT CACCTTATGC AATGGCTGGC TTAATTGATC TTAAAGATCG TTTTGATTTA
GCGTTTGGTA ATGATCCCGA TTTCGATCGT CACGGTATAG TGACAAAAAC CAATGGCTTG
ATGAATCCTA ATCATTATCT GGCGGTTGCC ATTGAGTATC TTTATGCTCA TCGTCCGGAT
TGGCCCACAG GACTAAAGGT CGGTAAGACC TTGGTTTCAA GCAGTATGAT TGACCGCGTC
GCTCATGATG CCAATCTCAC CGTGGCAGAA ATGCCAGTCG GGTTTAAGTG GTTTGTTCAA
GGTCTGCTGA AAAGTGAAAT TGGTTTTGCT GGCGAGGAAA GTGCCGGCGG TATCTTTTTG
CGTCGTAATG GTAAGCCATG GGCAACCGAC AAAGACGGCA TCATTTTATG TTTATTGGCT
GCAGAAATTC TTGCTGTTAC GGGCAAAGAC CCAAGTGAAC ATTACCAAGC TTTCACCAAA
AAATTCGGTG CACCTTTATA TACGCGTATT GATGTTGCTG CGACTCACGC ACAGAAACAG
GCGTTAAGCA AAGCGGACAA AAATGCAATT ACGTCCACTG AATTAGCTGG TGAACCAATT
GTGTCCATTC AAACCCATGC ATCGGGGAAT AACGCCGCGA TCGGCGGGGT GAAAGTGGCG
ACTGAAAATG GTTGGTTTGC TGCACGACCT TCAGGCACTG AAGAAATTTA TAAAATTTAC
GCAGAAAGCT TTAATGGTGA AAAACATTTA CAGCTTTTGA TCAAAGAAGC ACAAAATCTG
GTGGCGCGTA TATTTGTAAG CGTGAAGTAG
 
Protein sequence
MAIHSEAGKP ASQAQLVNVA QLISAYYSNK PDKSDISQGV TFGTSGHRGS AFKNTFTDTH 
IAAISQALAE YRQANSITGP MYVGMDTHAL SEAAFTTAIE VLAANGVKLV VQQDRGYTPT
PVISHAILDY NEGKESGLSD GVVITPSHNP PEDGGFKYNP PHGGPADSDV TNQIQARANE
LIHNDLLDVK RMSYQAAYDT GLVEEVDFSD NYIEQLDQVI DMKAIAQAGL TLGTDPLGGA
GLHYWDKIAK RYDLSIEVVN RKVDHQFGFM RRDKDGKIRM DCSSPYAMAG LIDLKDRFDL
AFGNDPDFDR HGIVTKTNGL MNPNHYLAVA IEYLYAHRPD WPTGLKVGKT LVSSSMIDRV
AHDANLTVAE MPVGFKWFVQ GLLKSEIGFA GEESAGGIFL RRNGKPWATD KDGIILCLLA
AEILAVTGKD PSEHYQAFTK KFGAPLYTRI DVAATHAQKQ ALSKADKNAI TSTELAGEPI
VSIQTHASGN NAAIGGVKVA TENGWFAARP SGTEEIYKIY AESFNGEKHL QLLIKEAQNL
VARIFVSVK