| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2195 |
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| Symbol | |
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| ID | 4172347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2651408 |
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| End bp | 2652460 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055203 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_661767 |
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| Protein GI | 109898512 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTG TTAATACGCA TAAACTCATT AGTCATTTAC AACAGCAGGG ACAGTTTTTA
ACGCTATCGC GTTGCTCTGG CGAATTAGTA CAAAACCCTA TTTCTTTCAC ACTTTATGAG
CACACGCAGG TCAGTATTAT CTCCCCTGGT ATTATTTCAT TTTCACCCAA AATAAAGAGT
GACAAAGCCA TTGTGCTATC GAGCGGGATC CACGGCAATG AGACAGCCCC TATTGAAATA
TGCGACCAAT ATGTCATAGA TATTTTGACG GGTAAAATAC GTGTTGCTCA TCGGATATTG
TTCATTTTTG GCAACTTGCC AGCAATGGAT AGAGCCACCC GCTTTGTAGA TGAAAACCTA
AATCGCTTGT TCAGTCATGC TCATGCAAGT GAGTCGGTTG ATCAAAACAG CTACGAATGT
GCTCGCGCGA AAGAAATAGA AGAGGCGGTC GCTGAGTTTT ACGGATCAGG GCACGGTGAG
GAGTCGCGCT ATCATTACGA TCTTCATACG GCTATCCGCC CATCGAAAAA TGAAAAGTTT
GCTGTGTATC CCTTTTTACA TGGCGAGAAG CACGACAAAG AGCAAATTAG TTTCTTGCTT
GCTTGCGGCA TCGATACCTT TCTACTCTCT GGTAGCCCTA CAACCACTTT CAGCTATTAT
TCCAGTCGTC AATTTGGGGC TCATGCCTTT ACGGTGGAAC TAGGTAAGGT ACAAGCGTTC
GGTCAAAATG ATATGTCTCG TTTCACCCAG GTTAACGACA CCTTGAAACG CTTTATTTCC
GGTCAACCAT TGAACCTGAA ATCGTTTAAT GATCAAGATG TGTTGATTTA CCAAGTAAAT
CAGGTGATCA ATAAGCATGC GGAAGACTTT GAGTTGGACT TTTCAGACGA TTTACCGAAC
TTTAGTGACT TTCCCAAGGG CACCTTATTG GCGCATGAAA CAGGCAATGA ATACCGCGCT
GAGTTTGACG GTGAAGCGGT TGTTTTCCCT AACGCAAACG TGGCAATTGG CCAGCGTGCG
ATTTTAACCG TAATCCCCAC TACGCTTGAT TGA
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| Protein sequence | MQTVNTHKLI SHLQQQGQFL TLSRCSGELV QNPISFTLYE HTQVSIISPG IISFSPKIKS
DKAIVLSSGI HGNETAPIEI CDQYVIDILT GKIRVAHRIL FIFGNLPAMD RATRFVDENL
NRLFSHAHAS ESVDQNSYEC ARAKEIEEAV AEFYGSGHGE ESRYHYDLHT AIRPSKNEKF
AVYPFLHGEK HDKEQISFLL ACGIDTFLLS GSPTTTFSYY SSRQFGAHAF TVELGKVQAF
GQNDMSRFTQ VNDTLKRFIS GQPLNLKSFN DQDVLIYQVN QVINKHAEDF ELDFSDDLPN
FSDFPKGTLL AHETGNEYRA EFDGEAVVFP NANVAIGQRA ILTVIPTTLD
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