Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2182 |
Symbol | |
ID | 4172334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2635239 |
End bp | 2637857 |
Gene Length | 2619 bp |
Protein Length | 872 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638055190 |
Product | hypothetical protein |
Protein accession | YP_661754 |
Protein GI | 109898499 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03502] extracellular lipase, Pla-1/cef family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000870738 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC TTTTGCTTAG TGCGAGTATC GCAGCTGTGC TGGGACTTAC AGGCTGTAAT GGAGACTCCG TAGCAGATAT AGAGACCAAT ACCCCCGTCG AAAAACCATT CGCCCGGGTA GTATTTGACC CTGCAAACAG CGATCTTAAT TTGCCCAACG ATTTGTTAAT GTTACCAAGT GGTAACTTTT TCGACTTTAC ATTAAATACC GAAGGCGATG CCGTATTTGA TGGCGGCAAC CCAGAACACG CACTAAGCGC GCTAGATGGA TGGTCAACAC AAAATCCATT TTCAATCAGA GTAACCCTAC CTACTGGACT TGATATTGAC GCAAGCAGTG TAAATGGCGC GTCCATCAAA CTATTTAAAG CAACCCAAGC CCTAGAAGGC ACCTCGGCAA CGTGTCAGGC CATAGCCGCA GTAGCCGCAG CACCAGGTGT ACCCTGTGAA CTAGGTGAAG AACTAGTGTA TGGGGTCGAC TTTGTCGCTT CCTACACCAA TGAAGGTTCA GGCTCAATTG CCGTTATACC TCTTAAGCCG TTGGCATCTA GCCAAGGCCA TATGTTGGTG GTAACTGATG CTTTGCTTGA TACTGATGGA AAGAGCGTTA AAGGCTCAAG TTCGTGGGAG CTCGCACGTC AAGATATTAA TACCTTACCC CTTGCCACCG AAGAGCAGCT GCAATTACAA ACATTAGTTA ATAGTTTGGT GGATGTGGTG ATCCCCTCTG GTATAGAGCG TGAAGCGATT TCTTATGCAG CATATTTTTC TACGGTCTCT GCTGGCACCG TGATGGATTC TGTTAAAAAA CTGCAAATTG CCGGTTATGC CACTGCGTTT GGCGCGACGA TGGCAGCGAC AGGCGGTAAC GTTGCAACCG CAGCAACCGT TGCTCGTGAT TACTTACCAC AACTAAATGT ATCGGCTGAG GGTATTACAA AAGCATTTGA CGTCTTGGCT CCAGCATTGC TATCTGAAGC CGAGTTAGCA CAACTAACGG CTGTGGGTTT AAATACCTGT GCCGGCCTTG TAACGAATAT CATGGACACC AGCTCTGCTT TAAACGAGGT GGCTACGCAA ACGTTTGAAA CAGCCGGTCC TTTCTGTGCA GCTACTCGCA TCGAAGGTGA GGTAAAATTA CCTTATTATT TGAGCACCAC CAATCCGTTA GGTGACTGGT GGCGCGCAAT GTGTACCAGT GGCGCTACGA TGCAACTAAT GGGCGCTGAA ACAGTGGGCT CATTAATCCA AGCTGGGGCT GTCGGGCCAA ATGATGAGCT GTGCCAAGTC GCATCTCAAG GGCAGTTGCG GGATTTAGAT TTATCGTCTT TAGGTATCGA CGACCCACGC AATTTGACCA AGTTTAATCC TTTGCCTATG GCGCAGGGAA CGAATGATGA TGATGAGTCA ACACCATTCA ACGAAGCGGG TACTGAAACG TTAGGCGTGC AGTTTACCGT ACCTGATGAG TCAGTGATTG CCATGCTATC GGCGGCAACG GGGGGCGCAA TTGACGTACC GACGAAACCT GAAGGTGGCT GGCCAGTCAT TATCGTTCAG CACGGTATTA CTGGTCAAAA AGAAAATGCG TTGGTCGTCG CAGCCGCGTT CTCTCTTGCG GGCTTTGCAA CGGTAGCTAT TGATCACCCA TTACACGGAG CTCGCGGTTT TACCTTAGCC GATGGAACGA ACGTAAATGC GTCTACCAAT TCGCCTACGG ATTACATGAA CCTTGCAAGT TTAATTACGG CTCGTGACAA TTTACGTCAA AGCGCGACTG ATACCCTAGG TTTGCGCCTA GCTTTGAATG CCATAAATGA TGCTTCAGGG ATAGTGGATG TTGATACATC TAAAGTTCAT TTCATCTCTC AAAGCTTGGG CTCTATCTCT GGTATGAACA CACTCGCTAA CGCTAATACG CCGTTCGAGG GTGATTTTGC CCCCTTTAGC GATATGTATA ATGTAGACAC CGCCGTGTTG AACGTGCCAT CAGGCGGCGT GGCAAATTTC TTATTTGAGT CACCTGACTT TGGGCCACTG ATTAAAGGCT CTTTATTAGC AGCTTCATCA GAAGACTTTG CCGCCTTTTT AGGCCAATTT GCGGCGGCCA ACGGACTTAC CGCAGAAGCG GCTATTCGCC CTGCCTTTAC CGCATTTTAT GGTGCATTAG AAGATGCACC TAAAGCAGAG ATTGATGCTA CTTTCAGTCA GTTTGTATTT GCGGCGCAGA CAATATTAGA TGCCGGTGAC CCCATTAATT ATGCTCAACA AATGGCGGGC AATACACCAA CGCTAATGCA ACTTGTTGTC GGTGGTGGAG TGAATGATGA TGGTACAACG GCGTTGACAG ACCAAGTTAA CCCTGTTGTT ACCTCATTGC CATTATCCGG CGGTATTCCC TTATCTAAAG TGATGGGCTT AGAGCAAGTG TCGGCCACAA AACAGAGTGA TACTACGCAA AATGGCGTTG TGTATTTCTC GGCTGGGGCG CACCAATCTT TGTTTGTGCC AACCCCGAGT GTTGCTGCAA CGGTAGAGAT GCAGAATCAA GCAGCCAAAT ACTTCGATTC AGAAGGAAAA GATATTGTTA TTTCAGATGA GTCTGTTGTG GCGAACTAA
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Protein sequence | MNKLLLSASI AAVLGLTGCN GDSVADIETN TPVEKPFARV VFDPANSDLN LPNDLLMLPS GNFFDFTLNT EGDAVFDGGN PEHALSALDG WSTQNPFSIR VTLPTGLDID ASSVNGASIK LFKATQALEG TSATCQAIAA VAAAPGVPCE LGEELVYGVD FVASYTNEGS GSIAVIPLKP LASSQGHMLV VTDALLDTDG KSVKGSSSWE LARQDINTLP LATEEQLQLQ TLVNSLVDVV IPSGIEREAI SYAAYFSTVS AGTVMDSVKK LQIAGYATAF GATMAATGGN VATAATVARD YLPQLNVSAE GITKAFDVLA PALLSEAELA QLTAVGLNTC AGLVTNIMDT SSALNEVATQ TFETAGPFCA ATRIEGEVKL PYYLSTTNPL GDWWRAMCTS GATMQLMGAE TVGSLIQAGA VGPNDELCQV ASQGQLRDLD LSSLGIDDPR NLTKFNPLPM AQGTNDDDES TPFNEAGTET LGVQFTVPDE SVIAMLSAAT GGAIDVPTKP EGGWPVIIVQ HGITGQKENA LVVAAAFSLA GFATVAIDHP LHGARGFTLA DGTNVNASTN SPTDYMNLAS LITARDNLRQ SATDTLGLRL ALNAINDASG IVDVDTSKVH FISQSLGSIS GMNTLANANT PFEGDFAPFS DMYNVDTAVL NVPSGGVANF LFESPDFGPL IKGSLLAASS EDFAAFLGQF AAANGLTAEA AIRPAFTAFY GALEDAPKAE IDATFSQFVF AAQTILDAGD PINYAQQMAG NTPTLMQLVV GGGVNDDGTT ALTDQVNPVV TSLPLSGGIP LSKVMGLEQV SATKQSDTTQ NGVVYFSAGA HQSLFVPTPS VAATVEMQNQ AAKYFDSEGK DIVISDESVV AN
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