| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2179 |
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| Symbol | |
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| ID | 4172331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2629462 |
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| End bp | 2630907 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055187 |
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| Product | deoxyribodipyrimidine photolyase |
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| Protein accession | YP_661751 |
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| Protein GI | 109898496 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTGCAC TAGTTTGGTT AAGAACTGAT TTAAGAAGTA AGTGGAATAG CGCGATAGAT
TATGCAGTTG ATAATCACGA TAATGTGACG GCGGTTTACT TTACCACCAA GGAGCAATGG
GACACTTATA ATCTGTCCAG CCACAAGGTA GCCCTCATAT ATCAGCGTTT AGTAAATCTG
CATAAAGAGT TGGCCGAACG TAACATAGAA TTGCAGGTTA TTGAGGGGAG TATTTACCAA
GCGATCCCCG TTCGCCTCAA GGATATTTGC ACCAAAATTG GCGTCACTCA TGTTTATTGC
AACGCTGAAT ATGAATGGGA TGAACGCCAG CGTGACTTGG CTGTTAAGAA TATTCTTAAA
AAGATTGATA TCCCCCTCGC CATGTTTCAC GACACTTGTT TAGTGAAACC CACTGAAATA
ATGAACCTTA AAAATGAGCC GTATAAAGTT TTCACGCCCT ATTTTAAGCG TTGGTTAGAC
ACGACCTTAC AGCAATTACC CGGTGTACCA GATAATCATA AAGCCAGTGA TACTGGTCTG
AGCCAATCAG CAAACGACAG CATCCAAATC GATTCATTAT TAAAAACAAA TGAGATAGAA
ATCAGTAAGG AGTTTTCGAC CAATTGGCCA ACCACCGCGG CTAAAATAAC TAAAAAACTG
AATGCATTTA TCATCGAATT TTCCCCAGTA TACCCAAAAA ATCGGGATAT TCCGTCAGTA
GACGGTACCA GTAAGGTCTC CCCTTATCTA TCTATCGGGG CCCTGAGTCC AGCGCAGTGT
TTATTTCATG TATTACAAGA GTACGGCGAT GATGCTTTGT CACTAGAACA CGGGGCCTAC
ACTTGGATAA AAGAAATTGC TTGGCGCGAT TTCTATCGCT ACGTAATGTA TCACTTCCCC
CATGTCAGCC GTGGGTTACC TTTTCAAAAG CATTATCAAC ACTTTAAATG GGAAAGTAAC
CAACACCATT TCGACGCATG GAAAGCAGGC AAGACAGGTT ATCCGATTGT CGATGCAGCA
ATGATCGCGT TGCGAGAAAC CGGTTGGATG CATAATCGTT TACGTATGAT AGTGGCGAGC
TTTTATTGTA AGCATCTTTT ATTACCTTGG AAGTGGGCTG AAGACTATTT CATGAGTCAG
TTGATTGACG GTGATTATGC TTCGAATAAT GGTGGCTGGC AGTGGAGCGC ATCGGTTGGC
ACTGATGCAG CGCCGTACTT TAGAATTTTC AACCCTACGA CCCAAAGCGA ACGATTTGAT
CCTAAAGGGG AGTTTATTAA AACGTGGTTG CCTGAACTTG AACATTTAAG TCCTAAGCAA
ATACATGAAC CCAGTAAACA CTGTGACGTC CAACGGATAG GCTATGCATT ACCTATCGTT
GAGCACAAAG CATCTGTTAT GCGTACAAAA GAACAATTTA AAGGCTTTTT AGCCGCCTTA
AAGTGA
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| Protein sequence | MSALVWLRTD LRSKWNSAID YAVDNHDNVT AVYFTTKEQW DTYNLSSHKV ALIYQRLVNL
HKELAERNIE LQVIEGSIYQ AIPVRLKDIC TKIGVTHVYC NAEYEWDERQ RDLAVKNILK
KIDIPLAMFH DTCLVKPTEI MNLKNEPYKV FTPYFKRWLD TTLQQLPGVP DNHKASDTGL
SQSANDSIQI DSLLKTNEIE ISKEFSTNWP TTAAKITKKL NAFIIEFSPV YPKNRDIPSV
DGTSKVSPYL SIGALSPAQC LFHVLQEYGD DALSLEHGAY TWIKEIAWRD FYRYVMYHFP
HVSRGLPFQK HYQHFKWESN QHHFDAWKAG KTGYPIVDAA MIALRETGWM HNRLRMIVAS
FYCKHLLLPW KWAEDYFMSQ LIDGDYASNN GGWQWSASVG TDAAPYFRIF NPTTQSERFD
PKGEFIKTWL PELEHLSPKQ IHEPSKHCDV QRIGYALPIV EHKASVMRTK EQFKGFLAAL
K
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