| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2144 |
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| Symbol | |
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| ID | 4173399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2594233 |
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| End bp | 2596191 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055152 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_661716 |
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| Protein GI | 109898461 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.267505 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGCAA CATCAAACAA CGTTCTTGCA CTAGGAGTGT GCGACTATCC GGAGCACGTT
CCGGCTAGTG AATGGAAAAC CCATGCAGAA CAACAAAAGG CTATGGGCTT GCAATATGTA
CGTCTAGCAG AGTTTTCGTG GGCTAAAATT GAACCTAGCG ACGGCATATT TGATTGGCAA
TGGCTTGATG ATGCGATTGA GACTTATGTT TCACAGGGCC TGAAAATTGT TATGTGCACG
CCAACTGCAA CTCCCCCTGC ATGGTTAGTT CAGAAGTATC CTGAAATGCT AGCTGTTGAT
GCGCAAGGCC AAACCATGAA GTTTGGCTCT CGTCGCCATT ATGACCATGC CTGTGATATT
TATCGCCAAG AATGTAAACG TATTACAACC CTTATGGCTC AGCGTTATGG TCAGCACACT
GATGTGATTG GTTGGCAAAC TGACAATGAA CTTGGCCACG AAGGGACAGC AGTATCTTAC
GGTGGTGCGA GTGCTGAGCG TTTCCCAAAA TGGCTTGAAG CTCGATATGA AACCTTAGAT
GCATTGAATG AGGCATGGGG TTGTGCATTT TGGAGCCAAG ACTACTCACA GTGGCAACAG
ATTTGTCCGC CTAATTTGAC TGCTGTACGT CAACCAAATC CGTCACAAGC GTTGGATTAT
CAACGCTTTT GCTCTGATAT GATTGAAGAA TTTCAACAAG TTCAAATCGA TGTACTTAGA
GCACTTTCTC CTCATCGCTT TTTGACTCAC AATTTTGTCA TTTTCGCTCA AGAGTTCGAT
TTATACAAAG TCGCCAAAAA TTTGGATTTT GTCGCTTGGG ATAGTTACCC GATCGGCATG
TTAGAATTTT TTGCCACGTG GGAAACTGAA CAAACAAAGT CGGAGTTTGC TCGGACCGGT
CACCCTGATC TAGTGAGCTT TAATCATGAT CTCTATCGCG GAATTAAAGG CGGCAAGGAT
TTCTGGGTGA TGGAGCAACA GTGCGGTCAT GCCAACTGGG CGCAGTATAA TCCGTTGCCG
GCTAAAGGGG CAGTGCAGCT TTGGACAGCC CAAGCCTGGG CCCATGGTGC GAGTTCAGTG
ACCTATTTTA GATGGCGCGC AAGCCATATG GCACAAGAAA TTATGCATTC AGGTTTATTA
CAACAAGATG GGCGGGCTGA CCGGGGGTAC CAAGAAGTTA ACGACTTCGA TACTGCTCAG
TTTGCACTGG AAAAAGTGAA CGTTCGAGTT GCTGTGCTTC ATGATTACAA CAGCCTGTGG
GCTTACAATC TTCAACCCCA CAATAAAGAT CTAAATTATT GGCATCAGTT TATGATGTTT
TACAGCGCAC TTCGTGAGTT AGGGGTAGAC GTAGACATTA TTCATCCCGA ACAACTTGCG
GACAAGGAGT ATGCTTTAGT TGTTGCGCCT GCGCTGACTA TCATGACATC AAAAATAGCG
TCTTATTTGA GCCAGAGTGC TAAAAATTGC CCTATTATTT TTGGACCACG CACTGCATTT
CGTAATGATA CAGGCCGAGT AGCAGATAAA GGACAATTTC AATTAATAGA AGATTTGGTA
GGTATCAAAT TAGCAAATTT TGATTCATTG CGCCCAACGC TTTCCCAATC AATTGAACAG
AGTGAAACGA GTACGGAATT TTTTGCAAAA CTTTGGTGTG AGAGCTATGA ATTAACCGAT
GCGGATGCCA CACACACGTA TGTAAACGGT CCCATGGCAG GACTTGCTGC GGTGACCAAA
AAAGATAATG TGAGCGTTAT TGGCGCTTTA TCAGGGGCTT TAATAAAGAG TGTTCTCAAT
TCGGCATTAG GTGAAGTAGG TATTGAAACC TTCACATTGC CTAAAGGCAT GAGATTGAGT
CGACGTGGTG AAACAACCCT TGTGCTGAAC TTTAATCAGC AAGACGTGGA ATGGAGTGGT
ACAACCTACC CAGGCGTATC TTTTACAACA CTCGACTAA
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| Protein sequence | MVATSNNVLA LGVCDYPEHV PASEWKTHAE QQKAMGLQYV RLAEFSWAKI EPSDGIFDWQ
WLDDAIETYV SQGLKIVMCT PTATPPAWLV QKYPEMLAVD AQGQTMKFGS RRHYDHACDI
YRQECKRITT LMAQRYGQHT DVIGWQTDNE LGHEGTAVSY GGASAERFPK WLEARYETLD
ALNEAWGCAF WSQDYSQWQQ ICPPNLTAVR QPNPSQALDY QRFCSDMIEE FQQVQIDVLR
ALSPHRFLTH NFVIFAQEFD LYKVAKNLDF VAWDSYPIGM LEFFATWETE QTKSEFARTG
HPDLVSFNHD LYRGIKGGKD FWVMEQQCGH ANWAQYNPLP AKGAVQLWTA QAWAHGASSV
TYFRWRASHM AQEIMHSGLL QQDGRADRGY QEVNDFDTAQ FALEKVNVRV AVLHDYNSLW
AYNLQPHNKD LNYWHQFMMF YSALRELGVD VDIIHPEQLA DKEYALVVAP ALTIMTSKIA
SYLSQSAKNC PIIFGPRTAF RNDTGRVADK GQFQLIEDLV GIKLANFDSL RPTLSQSIEQ
SETSTEFFAK LWCESYELTD ADATHTYVNG PMAGLAAVTK KDNVSVIGAL SGALIKSVLN
SALGEVGIET FTLPKGMRLS RRGETTLVLN FNQQDVEWSG TTYPGVSFTT LD
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