Gene Patl_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2143 
Symbol 
ID4173398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2593868 
End bp2594176 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content39% 
IMG OID638055151 
Productglycoside hydrolase family protein 
Protein accessionYP_661715 
Protein GI109898460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTA AGAAACAATA TTTAAAATCG AAACCCGTTT GTAAGGTCAC ATTTAAAATC 
AGCAAGGAAG AGGCTAAAGC AGCAGATTCT GTCAGTATCG TGGGTGACTT CAATGATTGG
GATAAGAAAG CTACTGTGAT GAAGAAGCTT AAGAATGGTA GCTTTTCTGC AGCCATGGAC
TTACCCGTTG AGAAAGAATA TCAGTTTCGT TACTTGTTAG ACGGTAAAGC GTATGAGAAT
GACTGGCAGG CTGATGCTTA TGCCATGTCT CCGATGTCTA ATGAAGAAAA CTCGGTTATC
AAGCTTTAA
 
Protein sequence
MAFKKQYLKS KPVCKVTFKI SKEEAKAADS VSIVGDFNDW DKKATVMKKL KNGSFSAAMD 
LPVEKEYQFR YLLDGKAYEN DWQADAYAMS PMSNEENSVI KL