Gene Patl_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2138 
Symbol 
ID4173393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2588142 
End bp2588471 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content42% 
IMG OID638055146 
Producthypothetical protein 
Protein accessionYP_661710 
Protein GI109898455 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA ACCTATTACC TACATTGCTA GCAGCATCGT CCTTACTATT CGCCAGTATG 
AGCTTTGCAA TAGAATTGGA TGACGCTAAA GCACAAGGTT TGGTTGGCGA GCAAACAGAC
GGTTATCTTG GTGCAGTAGT GAGTAAGCCT GACGTAATGT CTTTGATCAA AGAGGTAAAC
GACAAACGAA AGCAAAAGTA TGCGCAATTA GCTACTAAGA ATAACCTTAC TCTTGAGCAA
GTTGAAAAGT TAGCTGCGAA GAAAGCCTAT GAAAAAACCG ACACTGGGCA TTTTGTGTTG
GTTAACGGTG CATGGGTTAA AAAGCCGTAG
 
Protein sequence
MKTNLLPTLL AASSLLFASM SFAIELDDAK AQGLVGEQTD GYLGAVVSKP DVMSLIKEVN 
DKRKQKYAQL ATKNNLTLEQ VEKLAAKKAY EKTDTGHFVL VNGAWVKKP