Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2125 |
Symbol | |
ID | 4173380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2573012 |
End bp | 2574037 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055133 |
Product | fatty acid/phospholipid synthesis protein PlsX |
Protein accession | YP_661697 |
Protein GI | 109898442 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.325375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTCATC TAACCTTAGC GTTAGATATT ATGGGGGGCG ATAACGGCCC CCATATTATT CTATCTGCAG CTTTAAAAGC ACTGAATGAA TTCCCCCACC TAAATTTAAT TTTTTGCGGA GACGAAGATG TTATTACATC TTGGTTAAAC CAGCACTCCT CTTCCTTATC CAATCGATAT TCAATAGTTC ATTGCAACCA ACAGGTTTTG ATGGATGACA ACCCTGTTAA AGCGCTTCGT CATAAAAAAG ACTCGTCTAT GGCCTGTGCT ATTAAGCACG TTCACAATGA GCAAGCGGAT GCATGTGTAA GTGCGGGTAA TACAGGCGCT TTGCTGGCAA TGGCATGCTC TCAACTGAAA ACTCTCTCTG GTGTTAACCG TCCTGCTTTG GTATCAAGCT TACCCACTGC TAAAGGTCAC AAAGTCTATC TTTTGGATTT AGGCGCGACG GTACAAAGCG ACGCACAAAC GTTGCTACAA AATGCTGTGA TGGGGTCTGT ATTAGCTGAG CAAATTGCAG GAATTGAACG CCCGAGAGTG GCTATTTTAA ACGTGGGTGA GGAGCAAATC AAAGGCCCTG CGAATATCAA AGAGGCGAGT CAATTATTAG CCGCCAGCGA CCACTTAAAC TATATTGGGT TCGTTGAAGG TGACGATATA TTTAACGATA TTGCCGATGT CATTGTCACC GACGGCTTCT CAGGAAACAT CGCTTTAAAA TCCTGCGAAG GACTGGTTAA GTTATTGATA GAGCAAGTAA AGCGTGATGC TAAGCGAAAT ATATTGAGTA AAATCATGGC AAAACTGGCC ATGCCCCTAT TACGTCGTCT CTATTTGCGA GTGAACCCCG ACCAGTATAA CGGTGCGAGT CTGATAGGAT TGCGCGGAAT TGTGGTCAAA AGCCACGGAA ATGCCTCGGA TGAGGCTTTT TTGTATGCGA TCCGCGAAGC GGTTCAAGAA GCCGAAAGGC AAGTTCCCAC AAAAATTAAA GATAAGATTG AAAACCTCTT GATGGAGCGA TCGTAA
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Protein sequence | MRHLTLALDI MGGDNGPHII LSAALKALNE FPHLNLIFCG DEDVITSWLN QHSSSLSNRY SIVHCNQQVL MDDNPVKALR HKKDSSMACA IKHVHNEQAD ACVSAGNTGA LLAMACSQLK TLSGVNRPAL VSSLPTAKGH KVYLLDLGAT VQSDAQTLLQ NAVMGSVLAE QIAGIERPRV AILNVGEEQI KGPANIKEAS QLLAASDHLN YIGFVEGDDI FNDIADVIVT DGFSGNIALK SCEGLVKLLI EQVKRDAKRN ILSKIMAKLA MPLLRRLYLR VNPDQYNGAS LIGLRGIVVK SHGNASDEAF LYAIREAVQE AERQVPTKIK DKIENLLMER S
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