Gene Patl_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2125 
Symbol 
ID4173380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2573012 
End bp2574037 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content44% 
IMG OID638055133 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionYP_661697 
Protein GI109898442 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.325375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGTCATC TAACCTTAGC GTTAGATATT ATGGGGGGCG ATAACGGCCC CCATATTATT 
CTATCTGCAG CTTTAAAAGC ACTGAATGAA TTCCCCCACC TAAATTTAAT TTTTTGCGGA
GACGAAGATG TTATTACATC TTGGTTAAAC CAGCACTCCT CTTCCTTATC CAATCGATAT
TCAATAGTTC ATTGCAACCA ACAGGTTTTG ATGGATGACA ACCCTGTTAA AGCGCTTCGT
CATAAAAAAG ACTCGTCTAT GGCCTGTGCT ATTAAGCACG TTCACAATGA GCAAGCGGAT
GCATGTGTAA GTGCGGGTAA TACAGGCGCT TTGCTGGCAA TGGCATGCTC TCAACTGAAA
ACTCTCTCTG GTGTTAACCG TCCTGCTTTG GTATCAAGCT TACCCACTGC TAAAGGTCAC
AAAGTCTATC TTTTGGATTT AGGCGCGACG GTACAAAGCG ACGCACAAAC GTTGCTACAA
AATGCTGTGA TGGGGTCTGT ATTAGCTGAG CAAATTGCAG GAATTGAACG CCCGAGAGTG
GCTATTTTAA ACGTGGGTGA GGAGCAAATC AAAGGCCCTG CGAATATCAA AGAGGCGAGT
CAATTATTAG CCGCCAGCGA CCACTTAAAC TATATTGGGT TCGTTGAAGG TGACGATATA
TTTAACGATA TTGCCGATGT CATTGTCACC GACGGCTTCT CAGGAAACAT CGCTTTAAAA
TCCTGCGAAG GACTGGTTAA GTTATTGATA GAGCAAGTAA AGCGTGATGC TAAGCGAAAT
ATATTGAGTA AAATCATGGC AAAACTGGCC ATGCCCCTAT TACGTCGTCT CTATTTGCGA
GTGAACCCCG ACCAGTATAA CGGTGCGAGT CTGATAGGAT TGCGCGGAAT TGTGGTCAAA
AGCCACGGAA ATGCCTCGGA TGAGGCTTTT TTGTATGCGA TCCGCGAAGC GGTTCAAGAA
GCCGAAAGGC AAGTTCCCAC AAAAATTAAA GATAAGATTG AAAACCTCTT GATGGAGCGA
TCGTAA
 
Protein sequence
MRHLTLALDI MGGDNGPHII LSAALKALNE FPHLNLIFCG DEDVITSWLN QHSSSLSNRY 
SIVHCNQQVL MDDNPVKALR HKKDSSMACA IKHVHNEQAD ACVSAGNTGA LLAMACSQLK
TLSGVNRPAL VSSLPTAKGH KVYLLDLGAT VQSDAQTLLQ NAVMGSVLAE QIAGIERPRV
AILNVGEEQI KGPANIKEAS QLLAASDHLN YIGFVEGDDI FNDIADVIVT DGFSGNIALK
SCEGLVKLLI EQVKRDAKRN ILSKIMAKLA MPLLRRLYLR VNPDQYNGAS LIGLRGIVVK
SHGNASDEAF LYAIREAVQE AERQVPTKIK DKIENLLMER S