Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2123 |
Symbol | |
ID | 4173378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2571058 |
End bp | 2571987 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055131 |
Product | malonyl CoA-acyl carrier protein transacylase |
Protein accession | YP_661695 |
Protein GI | 109898440 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000456059 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAC GCGCGTGGGT GTTCCCAGGT CAGGGTTCAC AAACAGTGGG CATGTTGAAA GACTTAGCGG CTCATCATCC GCTAGTAGAA GAAACATTTA GCCGGGCAAG CAAGGTCTTA GGTTACGACC TTTGGGACGT AGTACAAAAC GACAATGGGC AAACATTAGG ACAAACGCAG GTGACACAGC CTGCGTTGTT AGCTGCTAGT TTCGCTATAT TCCAAGTTTT AAAAGCACAA AGCGCTAATT TACCGCACTA TCTTGCAGGT CATAGCTTGG GAGAATACTC AGCCCTTGTG TGTGCTGGTG TTCTATCATT TGAAGATGGC GTCAAATTAG TAGAAGCGCG CGGCCAGTTT ATGCAGCAGG CTGTCCCTGA AGGGGTAGGA GCGATGTATG CGATCATTGG TCTTGATGAT GCGAAAGTCA TTCAAGCATG CGAACAAGCG CAAAACGAAA CACAGCAAAT CGTATCTGCG GTAAACTTTA ATTCACCAGG CCAAGTCGTT ATTGCAGGCA ATGCAGAAGC TGCTGAAAAA TCAGCTGAGC TGTGCAAAGA AGCGGGCGCT AAACGCGCTC TACCTCTAGC AGTAAGTGTG CCTTCTCACT GTGCTTTGAT GAAACCCGCT GCAGATAAAC TTGCTGAGCT ATTTGAAACT ATTGAGTTTA CAACCCCTTC TATAGGGGTG GTAAACAATG TTGATGTCGC TATTGAATCT AATGTAGAAG ATATTAAATC TGCACTTTTG CGCCAGTTAT ATAGCCCAGT GCGTTGGACT GAAACCATTC AAAAGCTATC CGCTTTAGGC GTAAGCCAGA TTCATGAAAT TGGCCCAGGT AAGGTGTTAA CTGGCTTGAT AAAACGCATA GATAAATCAT TGAGCTGTGA TGCGGTAAAC AACGCAGAAA CAGTATCGAC AATTCAATAA
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Protein sequence | MSKRAWVFPG QGSQTVGMLK DLAAHHPLVE ETFSRASKVL GYDLWDVVQN DNGQTLGQTQ VTQPALLAAS FAIFQVLKAQ SANLPHYLAG HSLGEYSALV CAGVLSFEDG VKLVEARGQF MQQAVPEGVG AMYAIIGLDD AKVIQACEQA QNETQQIVSA VNFNSPGQVV IAGNAEAAEK SAELCKEAGA KRALPLAVSV PSHCALMKPA ADKLAELFET IEFTTPSIGV VNNVDVAIES NVEDIKSALL RQLYSPVRWT ETIQKLSALG VSQIHEIGPG KVLTGLIKRI DKSLSCDAVN NAETVSTIQ
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