Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2119 |
Symbol | |
ID | 4173374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2567618 |
End bp | 2568433 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055127 |
Product | aminotransferase, class IV |
Protein accession | YP_661691 |
Protein GI | 109898436 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00194364 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGTAA ATGGTTCATC CGCGACACAA CTCGCTATCA CAGATAGAGC GACCCAATAT GGCGATGGGT GCTTCACCAC CATGTTAGTT AGAGACGGAA AGGTCGAGTA CTGGGATGCG CACCTAACAC GGTTACAATC AACCTGTGAA CGTTTGTTAA TTTCTTCGAT AAATTGGGAT GAGTTAGCGC TACATGTCTC AGCTCTGGCA GAACAAAAAA CGCTTGGTGT GTTGAAAGTG TTAATTTCAC GAGGCTCCGG TGGACGTGGT TATAGCCCTG AGGGGGCGAA AACCCCTGTT TACATCGTTA GTCAACATCC ATTTCCTGCT CACTACCAAG ACTGGCAGCG AAAGGGTATC GAACTCAATG TCAGCAGTAT TACGTTGGCC AAGCAGCCAT TGCTTGCGGG TTTGAAACAT TTGAACCGCT TAGAGCAAGT ATTGATAAAG CATGAATTAG CTAATGATGC CTTTCATGAT TGCTTGGTTC TCGATACTGA TGATGTGATT GTTGAAACCT CGGTGGGAAA CATATTTTGG TATTGCGAAA ATGCTTGGCA TACACCTTCG CTTAATTTTA GTGGTGTCGA AGGCGTTATG CGTAACCAAG TGATGGCATA CTTATTGGCT AATCAAGTAC CCATCCATCA GTGTAGAGAA GGACTCAATA GCATACAATC TGCCTCAGAG GTTTTCGTGT GCAATAGCCT GATGGGCATT GTCCCGGTAT CAGCAATTGA GTTTAGTGAT GGTCACAGGG CATATTATTT AAATGAGAAA ACACGCGATT TACAAAACGG AGTAATGAAT TATTAG
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Protein sequence | MIVNGSSATQ LAITDRATQY GDGCFTTMLV RDGKVEYWDA HLTRLQSTCE RLLISSINWD ELALHVSALA EQKTLGVLKV LISRGSGGRG YSPEGAKTPV YIVSQHPFPA HYQDWQRKGI ELNVSSITLA KQPLLAGLKH LNRLEQVLIK HELANDAFHD CLVLDTDDVI VETSVGNIFW YCENAWHTPS LNFSGVEGVM RNQVMAYLLA NQVPIHQCRE GLNSIQSASE VFVCNSLMGI VPVSAIEFSD GHRAYYLNEK TRDLQNGVMN Y
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