| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2115 |
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| Symbol | |
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| ID | 4173370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2564158 |
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| End bp | 2564931 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055123 |
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| Product | TatD family hydrolase |
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| Protein accession | YP_661687 |
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| Protein GI | 109898432 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.774766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGTTTGTAG ATTCACATTG TCACTTAGAC CGATTAGATA AAAGCCCAGA AGAATTAGCG
GAAGTCATCC ATTTTGCACA GCAGCGCGGT GTCGAGCATT TCCTGTGTGT TTGCGTGTCC
GTCAATGACT TTCCAGCTAT GATGCAATCC ATTAAACCCT TCAATAACGT TTCAGCATCC
TGTGGTGTAC ACCCACTTCA CCAAGATGAG GCTTGCACTT ATGAAGAGTT ACTCACAATG
GCCAAGTCCG AGAATATCGT CGCGATAGGT GAGACAGGCT TGGATTATTT TTACAGTGCA
GATACAAAAG AAGTGCAGTT AACATCTTTT GTCGATCACA TAAAAGTAGC CAACGAATTA
AATAAGCCTT TGATCATTCA TACACGAGAT GCGCGCCAAG ACACCATTTC CTTATTGAAA
GAATACAAAG CGCCTCACAC ACGCGGTGTG TTGCACTGCT TTACAGAAGA CTGGGAAATG
GCTCAAGCGG CTATAGAATT AGGGTTTTAC ATTTCTATTT CAGGGATTGT CACCTTCAAG
AGTGCCCAAG AATTACAAGA CGTGGTTAAG AAAATTCCAC TGGAAAACCT ACTGATTGAA
ACAGACTCCC CTTGGCTCGC GCCTGTTCCC TATCGAGGTA AGCAGAACCA ACCCGGTTAC
GTACGAGAAG TAGGGGAGTT CATTGCTAAG CTAAAAGGGG TTTCCGTGGA TGAGCTGGCC
AAAGCCACCA CTGAAAACTT TTATACCTTA TTTAATATCC CCAGAACCAT CTAG
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| Protein sequence | MFVDSHCHLD RLDKSPEELA EVIHFAQQRG VEHFLCVCVS VNDFPAMMQS IKPFNNVSAS
CGVHPLHQDE ACTYEELLTM AKSENIVAIG ETGLDYFYSA DTKEVQLTSF VDHIKVANEL
NKPLIIHTRD ARQDTISLLK EYKAPHTRGV LHCFTEDWEM AQAAIELGFY ISISGIVTFK
SAQELQDVVK KIPLENLLIE TDSPWLAPVP YRGKQNQPGY VREVGEFIAK LKGVSVDELA
KATTENFYTL FNIPRTI
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