Gene Patl_2106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2106 
Symbol 
ID4173785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2551634 
End bp2552107 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content43% 
IMG OID638055114 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_661678 
Protein GI109898423 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.653273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTGA CTAATGCCCG TAACAATGCG GTTACATCAC AGGTTTCTAC TTCGACGTAT 
AATCTAGTTG CTTTGTTGTC GGGGATTTTA TTTGGCGCCG GTTTAACAAT TTCAACTATG 
GTTGACCCTG CTCGTGTCAT TGGCTTTCTT GATGTATTTG GTGCATGGGA GCCAACCCTC 
GCCTTTGTGA TGATGGGTGG AATATCCGTG TACATGCCTT TGTATTGGGC ATTCGTTAAA 
CCCAAAAATA GAACGATACT TGGTAGCTCA CTTCATCTGC CAACAAAAAC TGACATCGAT 
AAACCGCTGA TCTTCGGTGC ATTGCTGTTT GGTATCGGCT GGGGAATATC CGGAATATGC 
CCAGGGCCTG CATTAACCAA CATAACCAGT GGCGATATGG GTATATATGC TTTCATACTC 
TCTATGGTAG TTGGTATGAT TAGCGCCTCT AAAATGAGCA AAAAATTAGG ATAA
 
Protein sequence
MQVTNARNNA VTSQVSTSTY NLVALLSGIL FGAGLTISTM VDPARVIGFL DVFGAWEPTL 
AFVMMGGISV YMPLYWAFVK PKNRTILGSS LHLPTKTDID KPLIFGALLF GIGWGISGIC 
PGPALTNITS GDMGIYAFIL SMVVGMISAS KMSKKLG