Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2103 |
Symbol | |
ID | 4173782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2546805 |
End bp | 2547686 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055111 |
Product | hypothetical protein |
Protein accession | YP_661675 |
Protein GI | 109898420 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0483069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGTTA AGCGTATATT AGTTATCGCC GATCGTAAGG ATTCTTCGCA ACAAGCCTTA GCCCATGCAA CTTTGATGGC TAAGCAGTTT AATGCATCAA TTCATGTAGC CGGTTTTTGT TACGAACGCT TGTCCGTGCT AGATGAAAGC ATGTCTAAAA GTGACATCGA TACTGCTAAG CAAAAGATCG TCCAAGCCAG CCAAGCGTGG TTAGATGAAA CCGTGTCTGA ATCGTCATTA CCAGTATCAA CAACGGACGA AATGGTGTGG AGTAAAGACA TTGCCGCTTG GGTCACTAAA CATTGCTCAA CTCACCAGTA TGATTTAATT ATCAAAACTG GGCATCGCAG CGAACACGCG TTTTATGTAC CTACTGACTG GCAACTATTA CGCAGCGGTA ATGTGCCATT GCTCTTAGTG GCTGAAAAGA AATGGCGCAA AAAGCAATCG ATCATGCTCA CTCTTGACAT GGCTTCGACT AAAAAGACCA AGCAAGCACT TAATCAAAAA GTGATCGATG CGGGGAAAGT GCTAGCCAAC GCGAACAATA TGCCAATACA TGTATGTTTT AGTCTCGCCT TGTCACCTGT TCTCAAAGAT TTAGGCATCA TCGATAAGCG TAAATCGTTA AAAGAGGCTA AAAAGAAATA CATACCCAAA ATACAGGCTA TGTTTGGCAG CCAAGGTATC CTAGAAGAAA ACATACATAT TAAAGTAGGT TACGCCGATA AAGTGGTACC CAGTGTTGCA TCAGATGTGG GAGCGGCGTT GGTCATTATG GGCAGTGTTG GCCGCAAGGG CCTTAAAGCG AAAGTGTTAG GCAACACAGC AGAAAGCGTT TTGACCTTGC TAAAAACCGA TGTGCTGATC ATTCAACCCT AG
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Protein sequence | MNVKRILVIA DRKDSSQQAL AHATLMAKQF NASIHVAGFC YERLSVLDES MSKSDIDTAK QKIVQASQAW LDETVSESSL PVSTTDEMVW SKDIAAWVTK HCSTHQYDLI IKTGHRSEHA FYVPTDWQLL RSGNVPLLLV AEKKWRKKQS IMLTLDMAST KKTKQALNQK VIDAGKVLAN ANNMPIHVCF SLALSPVLKD LGIIDKRKSL KEAKKKYIPK IQAMFGSQGI LEENIHIKVG YADKVVPSVA SDVGAALVIM GSVGRKGLKA KVLGNTAESV LTLLKTDVLI IQP
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