Gene Patl_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2094 
Symbol 
ID4173773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2539618 
End bp2540040 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content44% 
IMG OID638055102 
Producthypothetical protein 
Protein accessionYP_661666 
Protein GI109898411 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGGTT ATCAAAAGAT ATTGGTTGCG TTAGATATTA ACAGTCCTGG GAACTTAGTG 
ATGAGTAAAG CGCTCGCAGT GGCTGATTCA CCCTCGAAGC TGAATCTGTT ATATGTCACG
TTTGCACAAA CGTATTTCGA ACCTTATGGT ATTGCGTTTG AAAATGACGA ACTAATAAAT
CTGCAAGCAC AATCTGAACG CAGACTAGAA GAAATTGCCG TGACATCAGG AATACCGAAA
GAGAACACAC ACGTTGCGGT GGGCTCTCCT GCTGATGAAA TACACCGATA TGCAGAGCGC
ATCGAAGCTG ACTTAATTGT TATCGGTACG CATGGCCAAA GTGGGCTAAA ACTGCTGTTA
GGATCCACCG CTAATGGTGT ACTGCATGGG GTCAAATGTG ATGTTTTGGC GGTAAAAGTG
TAG
 
Protein sequence
MLGYQKILVA LDINSPGNLV MSKALAVADS PSKLNLLYVT FAQTYFEPYG IAFENDELIN 
LQAQSERRLE EIAVTSGIPK ENTHVAVGSP ADEIHRYAER IEADLIVIGT HGQSGLKLLL
GSTANGVLHG VKCDVLAVKV