| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2085 |
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| Symbol | |
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| ID | 4173764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2530846 |
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| End bp | 2531640 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055093 |
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| Product | Crp/FNR family transcriptional regulator |
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| Protein accession | YP_661657 |
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| Protein GI | 109898402 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCAGT CTCATTCTAT ACAAGGCCCA ACGTGTGAAC ATTGCGCTCT ATCAAGAAAC
TGTACAGAAA AAGCGGAACA ACTAGCAAAT AAATCAAATA ATCCGGTTTT GACCCACAAA
ATTTACCATA AGGGTGACAA ACTGTTTTGT GCTGGTGATG CGTTTAACGC TTTATATATT
GTGCGCTCTG GCTCAGCTAA AGCGAGTATT TCATCTATGG ATGCTGAAGA GCAAATCGTT
GACTTCTGCT TTCCGGGCGA TTTAGTAGGT ACTGATGGCT TTGCACAACT GCAACACGCG
CAAACGGTCA CATTTTTAGA AACTAGCAGT GTGTGCTATA TCAGTCTGCA TTCAGTGAAT
GCTTTGCTGG CGAATTCCGA GCAGGGTCGT CAACAGCTTT TGGGTAATAT GAGCCGAAGC
TTACTGATGC AACAACAACA AACCATGAGC TATCACTGTA TGACATCTGC ACAGCGCGTG
GCAGGATTTT TACTAGATCT CTCGGCTCGA CTCGCTAAAA GAGGGCTGTC TAGCAACCAG
CTAACGTTAA GTATGACACG TATCGATATT GCTAATTACC TTGGCATGGC AATCGAAACC
ATTAGTCGTT TGCTTACGAC GATGCAACAA CAAGGCCTTA TTCAAGTTCA AAGACGCCAA
GTTACCTTGT TGGATATACC TAAATTACAA GCATTGAGTC GTTTTGAAGT AGAAGAAAAC
GATTCATTAT TTATGCAATC CAATACGGCG TTATTACATG CGAATTCGTA TACTTCGCAA
GCCATGATCC AGTAA
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| Protein sequence | MTQSHSIQGP TCEHCALSRN CTEKAEQLAN KSNNPVLTHK IYHKGDKLFC AGDAFNALYI
VRSGSAKASI SSMDAEEQIV DFCFPGDLVG TDGFAQLQHA QTVTFLETSS VCYISLHSVN
ALLANSEQGR QQLLGNMSRS LLMQQQQTMS YHCMTSAQRV AGFLLDLSAR LAKRGLSSNQ
LTLSMTRIDI ANYLGMAIET ISRLLTTMQQ QGLIQVQRRQ VTLLDIPKLQ ALSRFEVEEN
DSLFMQSNTA LLHANSYTSQ AMIQ
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