| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2082 |
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| Symbol | |
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| ID | 4173761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2526184 |
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| End bp | 2528328 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638055090 |
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| Product | histidine kinase |
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| Protein accession | YP_661654 |
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| Protein GI | 109898399 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCTTGA TATTACTTTG TCTGCCTTGG TTGTATGCTT ATTCCAGCGC ACAAGATAGA
GCTAAAGCGA GTGAGTTTGT TCAATTATCC TCTCAGCAGT CACTGCTTGT TCGTGACATC
ACGCTAAATT TATATCGTTT TGAACAGCCG CTCGCCATTA AAGAAAAGCG CGTTTTGAGA
CGTCAGAGTA TCGTTTTGAT GAAGCAATTT AGTGATAATC ACAGTTACTT TTTAATTGCT
GACTTACCAC GGAATGTCTT TCAAGGAGGT AATCACTCCG TTCATGATCT GTATTTTTCT
AACTCAGCTA ACATCGATAG CCTGTCAAAA GCGTTTTTTG CTTATGTTGA ACAAATTATT
ACATCAGGAT TGATCGAAAC CCGAAACAAC CAAGCCATTG AATCCAACAA GTATAATCCG
CTAGTAGATC ATTTAGATCA AGCAGAAGCA CAATTTACTG AAAATGAAAA ACAAGCCCGT
CGACATATGG TTAACGTTAG CATTCTTGCT AGCATTATCA GTTTGATTGT CTTTGCAATA
ACGATCGTGG CCCTAATCTA TCCTATCGAA CAAATGCTTT TTAAACTGAT AAATCGGTTT
TCTCTTAATA CCAAGCGCGC ATATCGAGTA AAGCGAGATG CCGGATTGGA CCAACAAACA
AAGAATCAAT TTCTGTCAAA TATGAGCCAC AAACTACGCT CTCCTATTAG TGGCATGTTT
GGCATGCTCG AGCTAGCCAG CCAAGAAACA GATATAGATA ATCAAAAAGC TTACATTCAA
AAAGCGCAAA AAGCGGGCAA TCAACTTTTG TCCCTCGTGG ATGAGTTATT AGACATATCA
CGCATCGAAG CAAAAGTACT AACCTTTGAC AAAATTGATT TTGAACTGCT GACCGTATTA
GATTCAGTTA TCGCCCCTAC TGCTTCTAGT GCTGAAACGA AAGGCTTAAC CTTTTCCTAC
AATGCGGCTT CCGCCCTTCC TCAATTCGCT ATAGGAGACC CACTTAGGCT CACTCAAGCA
TTAAAGAGCC TGCTAGATAA TGCAGTAAAA TTTACGGTAA ACGGTGGAAT TTCAGTCAAC
GTTAAACTTA GTATCGTTAA CAAGCATTAC ATGCTGGACG TTTTTATAAA TGATACTGGC
GTTGGTATAG AGCAAGACAA GCAAGATCAA ATTTTTAATA AATTTTTCCA AGTCGACAAA
ACAAAAAACA TTGCGATGAG CGGTGCGGGG TTGGGATTAA CCATTGCGAA AGAATTTGCA
CAAGGAATGG GCGGGGATCT TGCGTTAAGC AGTACTTTGG GAAGAGGCAG TACGTTTACA
CTTTCTGTAC CACTTGGGCG AAGTGAAAAG TGTGTTGGGT CAAATACGCC ACTGAACCTT
AATCCTAAAG CGAAGTTCGC CGTAATTGAT GATCTAGAAA CTAGCCGTTT ACACATTTCA
CATATACTGC AAGAAGATGG TTTCACGGTA GATTTGTTTG ACTCCGCTAC CCAATTCTTG
CTTATGAAAG ACGAAATTTT AGATTATGCA GGGTTAATTA TTGATATTCA TATGCCTGGG
TATAACGGCT ATGAATTAGC GGAAACTATC CATGCGATGT TTGGTACCAG TGCCCCGCCC
TTTATCTTCA TATCAGCTTC GCCTGAGTCC ATTCGTCATG ATCGATTTAA TACCGAACAT
ATGTGGCAAG GTTTCGCAAA ACCAATGGAT AAAAATCGAT TTATTGACTC AATCAGAGTG
CTGTCTGACA AAAGCTCTTT AAAAACAGAA GCCTTTGAGC CTGCTAGCGT ACTTCTTGTG
GAAGACGAGC CAATTAATGC AGAGGTCGTT AAAACAATGC TCGAGCGAAA CGGACACACA
GTCGAAGTGG CAACGACTGG TGCAGCGGCT CTTCATTTAG CAACAACGGT ACCTTTCAAC
TTAATCTTAA TGGATATTAA CCTGCCCGAT ATGAGTGGTA TTGAAACAAC AAGATGCATT
AAAGCCCAAG GTGTGGATAC TGAAATTGTA GCGCTTACCG GCAATGCCTA CGAAGAAGAC
AAACTAAAAA CAAAGGAAGC TGGCATGAGC TATCACTTGG TGAAACCCGT TATGTATCAT
GAATTGAACA ACGTGATTAA ATTAGCTCTA CGCGTTGCAC ATTAA
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| Protein sequence | MSLILLCLPW LYAYSSAQDR AKASEFVQLS SQQSLLVRDI TLNLYRFEQP LAIKEKRVLR
RQSIVLMKQF SDNHSYFLIA DLPRNVFQGG NHSVHDLYFS NSANIDSLSK AFFAYVEQII
TSGLIETRNN QAIESNKYNP LVDHLDQAEA QFTENEKQAR RHMVNVSILA SIISLIVFAI
TIVALIYPIE QMLFKLINRF SLNTKRAYRV KRDAGLDQQT KNQFLSNMSH KLRSPISGMF
GMLELASQET DIDNQKAYIQ KAQKAGNQLL SLVDELLDIS RIEAKVLTFD KIDFELLTVL
DSVIAPTASS AETKGLTFSY NAASALPQFA IGDPLRLTQA LKSLLDNAVK FTVNGGISVN
VKLSIVNKHY MLDVFINDTG VGIEQDKQDQ IFNKFFQVDK TKNIAMSGAG LGLTIAKEFA
QGMGGDLALS STLGRGSTFT LSVPLGRSEK CVGSNTPLNL NPKAKFAVID DLETSRLHIS
HILQEDGFTV DLFDSATQFL LMKDEILDYA GLIIDIHMPG YNGYELAETI HAMFGTSAPP
FIFISASPES IRHDRFNTEH MWQGFAKPMD KNRFIDSIRV LSDKSSLKTE AFEPASVLLV
EDEPINAEVV KTMLERNGHT VEVATTGAAA LHLATTVPFN LILMDINLPD MSGIETTRCI
KAQGVDTEIV ALTGNAYEED KLKTKEAGMS YHLVKPVMYH ELNNVIKLAL RVAH
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