| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2080 |
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| Symbol | |
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| ID | 4173759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2523825 |
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| End bp | 2524925 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055088 |
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| Product | OmpA/MotB |
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| Protein accession | YP_661652 |
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| Protein GI | 109898397 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC ACACGCTAGC AGTAGCCATT TCTTGTGCCT TGATTGGCGC AACTGCTCAC
GCTCAATCAT CATCTGAAAA AGAGATTTGG GGCGGCGTAT TTGGTGAGTA TTACTCAGTT
TATCCTGACA AATTTGAGCC TAACACTGAT TATGACAGTG GGTTAGGCTG GGGCGGCGAA
ATTGGAGTTA AACTAAATCC AGATTGGGGT TTTCGTTTTG AAGTGGCTAA GTTAGACATA
GATGCCGACA CAGGTAATGG CAACATAACC GGTGAGCGTA TCGGTGTAGA TGCGATGTAC
TTCATCAATC AGAGCAACTA TTACATTTTT GGTGGTCTGA AAAACCAGCG CTTTGACGAA
AGCTACCGTA TGGCTGATCT AGGTTTAGGT GCCCATTGGC AGTTGAACGA CAAATGGAAA
GTGATCACCG AACTTGCAGG GTACTATGAC TTTGGTCAAG GTAACCCTGA GTACAGCGCC
AAACTTGGTT TAGCGTATAG TTTTGGTAAA ACCGGTGGTA AGCGAGTCAG TAAAGATTCA
GATAACGATG GTGTCATTGA CCAACGCGAT TTATGCCCAA ATACACCTTA TGGAACAAGC
GTTGATGTTG ATGGTTGCCC GATGACAGCG GTTGATAGCG ACAATGATGG TGTAATCGAT
GCCAAAGATG CGTGTGCTAA CACGCCAATG AACGACAAAG TAGATGACAA AGGTTGCAGT
ATTTTCACTG AAGAGTCTAA AACAATGTCG CTAAAAATTA TGTTCGACAA TAATTCAAGT
AAGTTGAAGA ATATTGATAG TGCTAGCGTG CAAGAGTTTG TTGATTTTAT GCGCCGTTAC
GGAACAACCA ACGCTGTAAT AGAAGGTTAC GCTTCAGCGC CAGGCACGGA TGCATACAAT
ATGAAATTGT CAGTTGAGCG AGCACAAAAT GTTCGTCAAT ATCTAGTCGC TCAGTACAAC
ATTGCTGGCT CGCGCTTAGA AGCAGTCGGC TACGGTGAAA CGAAATTATT GGACTCGGCC
AATACCCGAG AAGCGCATCA GAAAAACCGT CGTATAGAAG CTTATGTCAC AGCAACGGTC
AAGATTGCAG TATCAAAATA A
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| Protein sequence | MKKHTLAVAI SCALIGATAH AQSSSEKEIW GGVFGEYYSV YPDKFEPNTD YDSGLGWGGE
IGVKLNPDWG FRFEVAKLDI DADTGNGNIT GERIGVDAMY FINQSNYYIF GGLKNQRFDE
SYRMADLGLG AHWQLNDKWK VITELAGYYD FGQGNPEYSA KLGLAYSFGK TGGKRVSKDS
DNDGVIDQRD LCPNTPYGTS VDVDGCPMTA VDSDNDGVID AKDACANTPM NDKVDDKGCS
IFTEESKTMS LKIMFDNNSS KLKNIDSASV QEFVDFMRRY GTTNAVIEGY ASAPGTDAYN
MKLSVERAQN VRQYLVAQYN IAGSRLEAVG YGETKLLDSA NTREAHQKNR RIEAYVTATV
KIAVSK
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