| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2078 |
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| Symbol | |
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| ID | 4173757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2521849 |
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| End bp | 2522679 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055086 |
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| Product | TM helix protein |
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| Protein accession | YP_661650 |
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| Protein GI | 109898395 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAGA ATATTAGTAT TTGGTTTGAA GCGGTGTCGG GCTCCCTTGC AGCGCTGCTA
GAAGAAATCG CCGCATTCAT CCCTTCGTTA TTTGCAGCAC TCGTCATTCT GCTTGTGGGC
TATTTTATAT CACGGGTTTT GCGCTTCGCA GTCTTTGCAG TATTGAATAA AGTGGGCCTA
GACAAATTAG CGAAGGCCAC TGGTATAGAT CAGCAGTTGA CCAAGTTTGG TAAAGACGTG
TCTGTATCTA GCACACTCGC CATGTTGGTA TTTTGGATTA CTTTTTTGGT CTTTATCGTA
ACCGCCGCAG ATTCATTAGG CTTATCACAA TTGGGCGAAA CGATGGATCA GTTCCTACGT
TTTATTCCTA AAATCATTGC TGCCACGTTA ATCCTGCTTT TTGGACTTGC GGCTGCCAAC
TTAATTAAAA ACGCTATTTT CAATGCCGCC AAAGCCGCAG AGTTTGATTT CGCTCGGCCG
TTGTCAAAAG CGGCATATGG ATTGGTCGCT ATTTTAACCT TGTCTTTGAC TATCAATCAG
CTTGATATTG ACACTGTGAT ACTGGATACG ATCATCGCCA TTGCCCTTGC GACGCTAGGG
GTTGGTACTG CTATCTCGTT AGGTTTAGGA AGCCGTGAAG CTTCGCAGAA CATTATTTAC
TCTTTATATA TATCAGACAC GGTCAAAGTT GGAGATACCG TCACTACAAA GGACGGTATT
AAGGGCAACG TGGTAGAGAT TACGGCCGTG GTCACCATTA TTCGTACATC GGACGAAAGC
CTAAAAGTAA TTGATAACAA AGTGTTTTTG GACGGACTGA CCATACATTA A
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| Protein sequence | MKENISIWFE AVSGSLAALL EEIAAFIPSL FAALVILLVG YFISRVLRFA VFAVLNKVGL
DKLAKATGID QQLTKFGKDV SVSSTLAMLV FWITFLVFIV TAADSLGLSQ LGETMDQFLR
FIPKIIAATL ILLFGLAAAN LIKNAIFNAA KAAEFDFARP LSKAAYGLVA ILTLSLTINQ
LDIDTVILDT IIAIALATLG VGTAISLGLG SREASQNIIY SLYISDTVKV GDTVTTKDGI
KGNVVEITAV VTIIRTSDES LKVIDNKVFL DGLTIH
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