| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2072 |
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| Symbol | |
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| ID | 4173751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2517274 |
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| End bp | 2517879 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055080 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_661644 |
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| Protein GI | 109898389 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.322625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAATG CACACGAGAT AGTAGAAAAG AACGTTGGTT TATTAACAAT CTTAATTTTG
GTCGCCATCA GTTTTGGCGC CATGGTTGAA ATCACCCCGT TAATGTTTCA ACAACAAACA
ATGAAACCAG TGGATGGTCT TGAGCCGTAC ACTGCCCTAG AAATGGAAGG TCGTGACATT
TACATTCGAG AAGGGTGTGT TGGTTGTCAT AGCCAGATGA TCCGTCCTTT TCGAGCTGAA
ACTGAACGCT ACGGCCACTA CTCTGTTGCT GGTGAGTCAG TTTGGGAACA CCCATTCCTG
TGGGGCTCAA AGCGCACAGG TCCTGATTTG GCCCGTGTGG GTGGTCGCTA CAGTGATGAA
TGGCACCGTG TTCATTTAAG AAACCCACGT GATGTGGTAC CTGAATCGAA TATGCCTGGT
TTTCCGTGGT TATTTGAAAA TCAGCTTTCG GGCGATTTAA CGGCGAAAAA ACTTGCTGTA
TTTCGTGACT TTGGTGTGCC TTACACCGAC GAAGATATTG CAGGGGCGAA AGCTGCGGTT
GAAGGTAAAT ATGAGATTGA TGCGTTGGTT GCATACCTAC AGTCTCTTGG AACTGCGTTG
AAGTAA
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| Protein sequence | MKNAHEIVEK NVGLLTILIL VAISFGAMVE ITPLMFQQQT MKPVDGLEPY TALEMEGRDI
YIREGCVGCH SQMIRPFRAE TERYGHYSVA GESVWEHPFL WGSKRTGPDL ARVGGRYSDE
WHRVHLRNPR DVVPESNMPG FPWLFENQLS GDLTAKKLAV FRDFGVPYTD EDIAGAKAAV
EGKYEIDALV AYLQSLGTAL K
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