| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2069 |
|---|
| Symbol | |
|---|
| ID | 4173748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 2515572 |
|---|
| End bp | 2516081 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638055077 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_661641 |
|---|
| Protein GI | 109898386 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3198] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.860685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTA CTTCTGAGCC GTCCATTACA GATAACAAAA AATGGTATAA ACAATTCTGG
CCGTGGTTTC TTATTACCAT CCCAGTGTGC TCCATGATTC TAAGCTTTAA TATGCTGCGT
TTCGCGTTTG ACGGACAAGA CGCCATGGTA GTCGATGATT ACTATAAACA AGGTAAAGCA
ATCAATATTA GCCTTGAGAA AATTCAAGCC GCAAAAGCCC TTAACATTCA AACTGAGCTC
AATGTCACTG AAAAAGATGT CAGTGTACGT TTTATCAGCG GTGCTCCCCA AACCGGTGCA
GCTTTGCGCT TAGCCTTTTA TCACGTCACG CAGGCCCCTA AAGATCAAAC CATTGATTTG
TTTCGCGATG CTCAAGGTAT CTATCGTGGC AGTGCTGAAA ATGACTTGAC CGGTAAATGG
CAGGTAGCAT TGATGCCACA CGATCAAGTA TGGAAGATTC AACAGACGCT TTCTTTTCCA
AGTGACGACA GCATAGCTTT TAATCCCTAA
|
|---|
| Protein sequence | MSPTSEPSIT DNKKWYKQFW PWFLITIPVC SMILSFNMLR FAFDGQDAMV VDDYYKQGKA
INISLEKIQA AKALNIQTEL NVTEKDVSVR FISGAPQTGA ALRLAFYHVT QAPKDQTIDL
FRDAQGIYRG SAENDLTGKW QVALMPHDQV WKIQQTLSFP SDDSIAFNP
|
|---|
| |