| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2068 |
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| Symbol | |
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| ID | 4173747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2513197 |
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| End bp | 2515572 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055076 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_661640 |
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| Protein GI | 109898385 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACA GCGTATCTTG TTACCACTGC GGCCTACCTG CGGTAGATGG CGATAAATAT
AACGTCTCCG TTTTAGGCCA AGAGCGACAA ATGTGTTGCC CAGGCTGCCA AGCGGTCGCT
CAAGCCATCG TAGAGAATGG CTTAGACGAT TATTACCGAT TTCGTACCGA GCCTGGGGTA
AAAGCCAGTG ATAATATTCA AGACACACTC GAGCAATTAT CCATATTCGA CGAACAGAGT
ATTCAACAAG ATTTTGTTGT TCATCAAGGT GATATCAGCG AAATTCAACT TAGCTTGAGT
GGGATCAGCT GTGCTGCATG TGGTTGGTTA ATTGAAAAGC AGTTATCAAA AGTCAGCGGC
ATTAAGCAAG TCTCTGTTAA CGTTACGGCG AACCGCGCAT TAGTCAGTTG GTATTCTGAC
GCGTTAAGCT TAAGCCAGAT CATGGCATCC ATTGAACGTA TTGGTTATCA CCCTAGCCCC
TTTCAACAAG AACAGCACGA GGCCCTATTT CAACAATCTC ACAAAGCACA ATTGAAACGT
ATTGGGCTCG CTGGCTTGAT GACAATGCAA GTTATGATGC TTGCAATAGG CGTGTATTTT
GATTTATTTG GCGATTTAGA GAGGGAAACT AGCTCATTTT TCAATTGGAT CAGTCTGGTG
TTGAGCACGC CAGTGGTGTT CTATTCGGGT GCGGGGTTTT ATCAAAGTGC CTTTAAAGCC
CTAAGGGCCA AAAGCGTGAA CATGGATGTC CCCGTGTCAA TAGCGCTCCT CGCCACCTAT
TTTTCTGGCG TTTGGGCGAC AGTATTCGAA CAGGGGCAGG TGTATTTTGA GTCCGTTTGT
ATGTTTATCT TCCTGTTACT CGTGAGCCGT TTTATTGAGC ATCAGGCGCG GCACAAAGCA
GCACAAATTT CGGCTAATAT GCTGCAATAT ATTCCCCTCA CTGCAAATTT GATGGTAGAA
AATGAAATTC AGCCAACGCT TGCAAAATCA CTGCAGCTCG ACGATGTTAT TTTAGTTAAG
GCTGGCGAAA CCGTGCCTAT CGATGGCACG GTGCTAAGCG GGCATGCACA AGTTGATGAA
TCACTGCTGA CGGGAGAATT CTACCCAGTC AATAAAACTG TTGGCGATGC GGCATACGGC
GGCACTATTA ACAAAAGCGG CACCTTGACC TTAACAGTCA CCTCACAATT TAAATACGCT
TTAGTCAATC AAATTGCCCG TTTGCAAGAG CAAGCCATGG CCAACAAACC AAGAATTGCC
GCCATGGCAG ACCAATTCTC CCAGTACTTC GTTGTCGCAG TGCTGTTTTT TGCATCTGGC
AGTTTTATTT ATTGGTGGTT ACAAGGTGAT CCTGATGCTT TTTGGATTGC TATTTCGGTA
CTTATCGCTA CCTGCCCCTG TGCGCTAGGC CTAGCAACGC CCTCGGCGTT ATCATTTGCT
ATGGCAAATT TGAACAAACA AGGGGTGCTG TTGAAGCGCT CCGATGTCTT AGAACAACTG
ACGCAGGTCG ATCATATTGT ATTAGATAAA ACCGGTACCT TAACCGAAGG CGAAGTGTCA
TTGGCGGCCA TACATAATAT TTCATCATTC GATGATGAAA CACTTCTTAT GTACGCTCAC
AGTGTAGAGC AATATTCTGA GCACCCTATT GCTAAAGCGT TTGAAGCATA TCCGGTTTTC
TCTGATGTAA AGGCATTCAG CTTTACCCTG GGTGAAGGTG TAAGTGCGAT AGTTAATCAC
CAACAAGTCG AAATAAGTGC AGCGCATAGC CATGAACGCC CTAACGATCC GGCATTAAAA
ACTAGCAGTG TGCTTATGCA TATCGACGGT GAGCTAGTTT GCGGATTTGA GCTAAGCGAC
ACACTTAGAC CTGATGTACC TGACATGCTA TTGCGAATGA GCCGCAAGGA CATCACGTTA
TTAAGCGGCG ACAATCAAAA AAATGTAAGT CAAATCGCAT CAGATATCGG CATTTCTAAT
TGGCTCGCTC AACAAACGCC ACAGGATAAA CTAGCTTACG TTCAAAAATT ACAAGCAAAC
GAGCATAGCG TGTTGATGAT TGGGGACGGT ATAAACGATG CCCCCGTATT GGCCCAAGCT
GATGTAGCTG TCACCTTAGG TGCCGGAGCT GATTTAGCAA AATCATCGGC AGATATTATT
TTGCTTAAAA ATGCGTTAGG TAAGCTGCCT GATGTATTCA TTGTGGCCCA GCGCTGCAAG
CAAAAAATCA GACAAAATAT GGCTTGGGCC TTAGGGTACA ATGTGTTGGT ACTTCCCTTA
GCAGTAAGTG GGGCTCTGAC GCCTTGGATG GCAGTCATTG GTATGTCCCT TAGCTCCATT
ATTGTTGTGG TTAATTCCGT GCGGTTACTT AAATAA
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| Protein sequence | MTDSVSCYHC GLPAVDGDKY NVSVLGQERQ MCCPGCQAVA QAIVENGLDD YYRFRTEPGV
KASDNIQDTL EQLSIFDEQS IQQDFVVHQG DISEIQLSLS GISCAACGWL IEKQLSKVSG
IKQVSVNVTA NRALVSWYSD ALSLSQIMAS IERIGYHPSP FQQEQHEALF QQSHKAQLKR
IGLAGLMTMQ VMMLAIGVYF DLFGDLERET SSFFNWISLV LSTPVVFYSG AGFYQSAFKA
LRAKSVNMDV PVSIALLATY FSGVWATVFE QGQVYFESVC MFIFLLLVSR FIEHQARHKA
AQISANMLQY IPLTANLMVE NEIQPTLAKS LQLDDVILVK AGETVPIDGT VLSGHAQVDE
SLLTGEFYPV NKTVGDAAYG GTINKSGTLT LTVTSQFKYA LVNQIARLQE QAMANKPRIA
AMADQFSQYF VVAVLFFASG SFIYWWLQGD PDAFWIAISV LIATCPCALG LATPSALSFA
MANLNKQGVL LKRSDVLEQL TQVDHIVLDK TGTLTEGEVS LAAIHNISSF DDETLLMYAH
SVEQYSEHPI AKAFEAYPVF SDVKAFSFTL GEGVSAIVNH QQVEISAAHS HERPNDPALK
TSSVLMHIDG ELVCGFELSD TLRPDVPDML LRMSRKDITL LSGDNQKNVS QIASDIGISN
WLAQQTPQDK LAYVQKLQAN EHSVLMIGDG INDAPVLAQA DVAVTLGAGA DLAKSSADII
LLKNALGKLP DVFIVAQRCK QKIRQNMAWA LGYNVLVLPL AVSGALTPWM AVIGMSLSSI
IVVVNSVRLL K
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