Gene Patl_2060 details

Gene Information

• Locus tag: Patl_2060
• ID: 4173739
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 2506396
• End bp: 2507139
• Gene Length: 744 bp
• Protein Length: 247 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638055068
• Product: hypothetical protein
• Protein accession: YP_661632
• Protein GI: 109898377

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAACAAA ACAATAAAAA CACACTGGGC GGTGACATTA ATCAATCGTT GTCTGGCGAT 
ACGCAGCTTG ATCTCAATGC ATGCGTTAAA GAAGGCTGGT TACTGTCAAA ACGTCACTTT 
TATCGTATTT TGCAAGGGGC ATTATTCACC TTAGGCATGA TCCTGCTATT ACTGATGTTG 
ATAGGTCGAT TCGTCAGCAT TGAAGAATTA CAAAACCCGT CGGTGTCCCT CAGTTTCGGC 
CTAAACTTGC TTTTTACACT CATTACCACG CCGCTTATCA CTGCGCTAAT GATGATGGGG 
ATTGGCCATA GCGTTGGCCT ACAAGTAGCC TTTATGAACT TGGTAAAGCG AATGGCGGGG 
TCGGCTATGT TGATTTTCTG TGCTTTGATG CTAGGTGCTC TAGTCAATTT GGGATTGGGC 
TTATATATTT TGCCTGGGAT ATATCTGGCT ATGTCCACCG GATTTACCCT AATTCTTTTG 
GTTGAGAAGA AATACCGACC CAGCCAAGCC ATATTGGTAT CAATGCGCGT GTTTAATCGC 
TATTGGTTGC CGTTGAGCCA GTTTTATATT GTTTCTTTTG TCCTCTTTAT TGCAGGCCTG 
TTTACCTTTG GTATTGCACT TGTTTGGATT GTGCCTTGGT ACCTTCATAC TAAAGGCGTG 
TTGTACCGTA CTTTGTTTGG TGTTGAAGTC AGTGGCCAAC CTTCGAATAA AACAGACAAT 
AAAGACTCGG TTTTTTATGC ATAA 

 

Protein sequence

MEQNNKNTLG GDINQSLSGD TQLDLNACVK EGWLLSKRHF YRILQGALFT LGMILLLLML 
IGRFVSIEEL QNPSVSLSFG LNLLFTLITT PLITALMMMG IGHSVGLQVA FMNLVKRMAG 
SAMLIFCALM LGALVNLGLG LYILPGIYLA MSTGFTLILL VEKKYRPSQA ILVSMRVFNR 
YWLPLSQFYI VSFVLFIAGL FTFGIALVWI VPWYLHTKGV LYRTLFGVEV SGQPSNKTDN 
KDSVFYA