| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2056 |
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| Symbol | fumC |
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| ID | 4173735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2502246 |
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| End bp | 2503655 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055064 |
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| Product | fumarate hydratase |
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| Protein accession | YP_661628 |
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| Protein GI | 109898373 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0114] Fumarase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGCC CACGTGACAA GAACGCTGAT TCATCTCCAG AACATCCAAC TTCACTAAGT
TCATCATCCG AGACCATATC TGGCGACTCT CAAGCACCCG AGATGCTATA TAAAGAGCAA
ACTTCCCTCG CGTTAGATAA TTTCAAAATA AGCGGCACGC CCATGCCAAG TGAGTTCATT
CATGCGTTAG CGTTACTAAA AGCAAGCGCG GCGTATGCCA ATGCTGAAGT GGCTGGTTTA
GACAGTGAAA TAGCCATCGA CATACAGCGC GCTGCTATGG AGGTTGCACA AGGCGATCAC
GATAACGCAT TTATGGTGGA TGTGTATCAA ACAGGATCTG GCACCAGCAC CAATATGAAC
GCCAACGAAG TTATTGCGAC CTTAGCCGAA CGAAAACTTG GCAGGCATGT ACACCCCAAC
GATCATGTTA ACATGGGGCA AAGTTCAAAC GATGTTATCC CCAGCGCTAT TCATGTAAGC
GCAACATTAG CCCTAAGCCA GCACTTAATA CCTGGATTGC AAAGTTTACA ATCAGCCATT
GATGCCAAAA GCATTTTGTA TCGAGATACG GTGAAAACAG GTCGCACTCA TTTAATGGAT
GCTATGCCGA TTACGCTGGG CCAAGAATTG AGTGGTTGGA GCAAGCAAAT TCAACAATCA
ATTAGCCGTC TAATTGAAGT ATTACCGCGT ATTTCCGCAT TGGCATTAGG GGGCACAGCC
GTCGGCACTG GGATCAATAC CCACCGGGAT TTCGCCGCCA CTGCGTGTCG CCATTTAAGT
CAATTAACTG GCCTGCGTTT TATGCCAGTG GATAATTATT TTTCTGCCAT CAGCAGCCAA
GACACAGCGG TTGAAGTCAG CGGACATCTC AATACGCTGG CAGTAAGCTT AATGAAGATA
TGCAATGACC TCAGGTGGAT GAACAGCGGC CCACTGACTG GACTTGGGGA AATAGCGCTA
GATAAACTGC AAGCAGGAAG TAGCATCATG CCGGGGAAGG TGAACCCCGT GATACCTGAA
GCTTTGGCTA TGGTGTGCGC ACAAGTCATG GGGTATCACC AAAGCATCAC GATTGCAGGC
CAGTCAGGTA ATTTTCAACT AAATACCATG CTACCTCTTA TTGGGTACAA CTTGTTAACC
AGCATTTCCA TCTTAAGTAA CGGCATTAAC GCCCTCACCC ATAAAGCGAT TGTCACTATG
AGGGCCAACA GTGATCGTAT GGCCGAATCG ATCAGCATGA ACCCCATATT AGTTACAGCA
TTAAACAATA GAGTGGGTTA TGAGAAAGGC GCATTGATTG CCAAAGCGGC GTATGAGGAA
AAACGCCCAG TCATTGATGT TGCCGCACAA ATGACAGACA TTCCTCGGGA GGAACTTGAA
AAATTACTCG ATCCAAAATC GATGACTTAA
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| Protein sequence | MHSPRDKNAD SSPEHPTSLS SSSETISGDS QAPEMLYKEQ TSLALDNFKI SGTPMPSEFI
HALALLKASA AYANAEVAGL DSEIAIDIQR AAMEVAQGDH DNAFMVDVYQ TGSGTSTNMN
ANEVIATLAE RKLGRHVHPN DHVNMGQSSN DVIPSAIHVS ATLALSQHLI PGLQSLQSAI
DAKSILYRDT VKTGRTHLMD AMPITLGQEL SGWSKQIQQS ISRLIEVLPR ISALALGGTA
VGTGINTHRD FAATACRHLS QLTGLRFMPV DNYFSAISSQ DTAVEVSGHL NTLAVSLMKI
CNDLRWMNSG PLTGLGEIAL DKLQAGSSIM PGKVNPVIPE ALAMVCAQVM GYHQSITIAG
QSGNFQLNTM LPLIGYNLLT SISILSNGIN ALTHKAIVTM RANSDRMAES ISMNPILVTA
LNNRVGYEKG ALIAKAAYEE KRPVIDVAAQ MTDIPREELE KLLDPKSMT
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