| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2043 |
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| Symbol | |
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| ID | 4173917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2488370 |
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| End bp | 2489497 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055051 |
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| Product | Serine--pyruvate transaminase |
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| Protein accession | YP_661615 |
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| Protein GI | 109898360 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCGC AATTCAATAC TTTTATTCCA CCTGTTAGGA CATTAATGGG CCCAGGGCCA
TCAGATGTCG ATCCTCGTAT TTTAAACGCA CTTTCTCGTC CGACACTTGG GCACCTAGAC
CCAGCGTTTA TTCAGTTGAT GGACGAAGTT AAATCATTAC TGCAATTTGC ATTCAAAACC
GACAATCAAC TCACAATGCC CGTGTCTGCG CCCGGATCAG CAGGTATGGA GTCCGTCTTT
GTAAACTTGC TTGAGCCAGG AGATAAAGTC ATTGTGTGTC AAAATGGCGT GTTCGGTGGC
CGTATGCAGC AAAATGTTCT ACGCTGCGGC GCGACAGCTG TAATGGTTCA GGATACATGG
GGTAAGCAAA CCGATTTACA CAAGGTCGAA GATGCCCTTA AGGCAAATCC TGATGCAAAA
GCTGTGGCAT TCGTTCACGC AGAAACATCC ACCGGTGTGC GTAACGATGC CAAGGCAATT
TGTGAGCTTG CCAAGCGATA CGATTGCTTA ACCATAGTCG ATGCAGTGAC CTCATTGGGC
GGCATTGAGC TGGACGTTGA TGGTTGGAAT ATTGATGCTA TTTATTCAGG AACTCAAAAG
TGTCTGTCAT GTGTACCTGG CCTATCACCT GTTTCATTCA GCCCGGCTGC CGTAGAAGTG
ATCAAAAATC GCAAGACACC CGTGCAAAGT TGGTTTTTGG ATATGGATTT AGTGATGGGG
TACTGGGGCA AGGGCGGCAA ACGCGCGTAT CATCACACAG CACCAGTAAA TAGTTTATAT
GCCTTGCACG AATCGTTACG CATTTTACAT AACGAAGGGC TTGAGCAGGC ATGGAAACGC
CATGCAGACA TGCATCAAGC ATTAAAGACA GGCCTTGAAG GCATTGGCCT GGAGTTTGTT
GTTGATGAAG CCTATCGTTT ACCGCAGCTC AACATGGTGA GCATTCCAAG CGGCGTGGAC
GATGCACAAG TCCGCGGCCA ATTGCTAAAT GAATTTGGCT TAGAGATTGG TGCCGGGCTA
GGGGAGTTGG CTGGAAAAGT ATGGCGTATC GGCCTGATGG GATATGGTAG CAACAAGAAA
AACGTTGATT ACTGCGTGAG TGCACTCACA CGCGTGTTAA ACCGATAA
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| Protein sequence | MTAQFNTFIP PVRTLMGPGP SDVDPRILNA LSRPTLGHLD PAFIQLMDEV KSLLQFAFKT
DNQLTMPVSA PGSAGMESVF VNLLEPGDKV IVCQNGVFGG RMQQNVLRCG ATAVMVQDTW
GKQTDLHKVE DALKANPDAK AVAFVHAETS TGVRNDAKAI CELAKRYDCL TIVDAVTSLG
GIELDVDGWN IDAIYSGTQK CLSCVPGLSP VSFSPAAVEV IKNRKTPVQS WFLDMDLVMG
YWGKGGKRAY HHTAPVNSLY ALHESLRILH NEGLEQAWKR HADMHQALKT GLEGIGLEFV
VDEAYRLPQL NMVSIPSGVD DAQVRGQLLN EFGLEIGAGL GELAGKVWRI GLMGYGSNKK
NVDYCVSALT RVLNR
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