| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2041 |
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| Symbol | |
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| ID | 4173915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2486604 |
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| End bp | 2487458 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055049 |
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| Product | palmitoyl-CoA hydrolase |
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| Protein accession | YP_661613 |
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| Protein GI | 109898358 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATA TTAAATTAGT AGATTTACTC ACCCTAGAAA AAATAGAAGA CGGGTTATTT
CGCGGACAAA GCTGGGATCT TGGCTTTCGC GCTTTATTTG GCGGCCAAGT GATGGGACAA
GCTATAGCAG CGGCGCAATT AACCTTGCCA GAGGGGCGAG TTGCGCATTC ATTTCATGCC
TATTTTTTGT TACCAGGGGA TGCTAAAAAA CCAGTGGTGT TTGATGTGCA AACCGTACGT
GACGGGCGCA GTTTCTCGAC TCGTCGGGTA AAAGCTATTC AAAATGGTCG CAGTATTTTT
TATATGACAG CGTCTTTTCA GCAACCGGAG CAAGGATTAG AGCACCAGTT TGCCCAAATG
CCAGATGTAC CCATGCCAGA AGATTTGCCC AGAGACACCA CATTCGATGA TAAGGAATTG
GGAAAGTTAT CAACACGCAT GCGCGAAGCC ATTGCCTATC ATAAACCCTT AGATATGCGC
TCTGTTCAGC AAATTGATCC GGTGAATCCA GGTGTGCATG AGCCAAAACG CTATATTTGG
ATGAAAGCGG AGGAGGCGTT GCTTGGTAAT GTTCATTTGA ACCAAGCGAT GCTGTCATAT
GCGTCAGATT ATCATTTTTT GTCTACTGCC ATTCAGCCCC ACGGTGTGTC CGTTCGAGAT
AAAAATCTAA TTATGGCGAC AATCGACCAT GCGGTGTGGT TTCACCATCC ATTCGATTTT
GATGATTGGG TTTTATATTG CGCTGAAAGC CCGTTTAGCG GCGGTGCACG TGGTTTGGTG
CGTGGTCAAT TCTTTAATCG TCAGGGCAAG CTTGTTGCGT CAAGTATGCA AGAAGGCTTA
ATGCGCAAAA TTTAA
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| Protein sequence | MSDIKLVDLL TLEKIEDGLF RGQSWDLGFR ALFGGQVMGQ AIAAAQLTLP EGRVAHSFHA
YFLLPGDAKK PVVFDVQTVR DGRSFSTRRV KAIQNGRSIF YMTASFQQPE QGLEHQFAQM
PDVPMPEDLP RDTTFDDKEL GKLSTRMREA IAYHKPLDMR SVQQIDPVNP GVHEPKRYIW
MKAEEALLGN VHLNQAMLSY ASDYHFLSTA IQPHGVSVRD KNLIMATIDH AVWFHHPFDF
DDWVLYCAES PFSGGARGLV RGQFFNRQGK LVASSMQEGL MRKI
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