Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2037 |
Symbol | |
ID | 4173911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2480969 |
End bp | 2481946 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638055045 |
Product | transketolase, central region |
Protein accession | YP_661609 |
Protein GI | 109898354 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA TGAACATGTT ACAGGCGATC AATAATGCCT TGATTACGGC CATGTCCGGT GATGAGAAAG TCATGGTATT TGGTGAGGAC GTAGGTCACT TCGGTGGTGT ATTTAGAGCG ACCAGTAATT TACAGCACCA ATTTGGTAAA GGTCGCTGTT TTAATACACC GTTAACTGAA CAGGGGATTA TAGGCTTTGC TAATGGCCTG GCATCGCAAG GCTCTGTGCC GGTGGCTGAA ATTCAATTCG GTGATTATAT CTTCCCTGCG TTTGATCAAA TTGTGAATGA AACTGCTAAA TTTCGCTATC GCTCTGGTGG TCAGTTCACC TGTGGCACCC TGACCATTCG TACTCCATAT GGCGGTGGTA TTGCTGGTGG CTTATATCAC TCACAATCTC CAGAAGCTTT TTTTGCTCAC ATACCCGGCA TGAAAATCGT TATCCCGCGT AATCCATATC AAGCTAAAGG CTTGCTGTTG GCGTCTATTC GTGACGATAA CCCTGTTTTG TTCATGGAGC CTAAGCGTTT ATACCGCGCG TCTGTAGGTG ACGTACCTGA GGACGATTAT GAGCTACCTT TAGGCAAAGC CGAGGTGGTT AGAAAAGGTG AGCATATTAC CTTACTGGCC TGGGGGGCTC AGGTTGAGGT CATCGAAAAA GCAGCTGAAA TGGCCGAAAA CGATGGCATT TCGTGTGAAA TTATCGATTT ACGCAGCATT TTGCCTTGGG ATGCCCAAAC GGTGAGCGAG TCGGTGAGAA AGACCGGGCG ATTACTTATC AACCATGAAG CACCGCAAAC GGGCGGGTTT GCCAGTGAAA TATCCGCTAC CGTACAAGAG CGTTGCTTCT TGTATTTAGA GTCACCGATA ACCCGAGTGT GCGGATTAGA CACGCCATAT CCGCTGGCAC ATGAAAAAGA ATACATGCCG GATCGTCTTA AAACTTACGA AGCCATTAAG CGCTGCGTGA ATTTTTAA
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Protein sequence | MTKMNMLQAI NNALITAMSG DEKVMVFGED VGHFGGVFRA TSNLQHQFGK GRCFNTPLTE QGIIGFANGL ASQGSVPVAE IQFGDYIFPA FDQIVNETAK FRYRSGGQFT CGTLTIRTPY GGGIAGGLYH SQSPEAFFAH IPGMKIVIPR NPYQAKGLLL ASIRDDNPVL FMEPKRLYRA SVGDVPEDDY ELPLGKAEVV RKGEHITLLA WGAQVEVIEK AAEMAENDGI SCEIIDLRSI LPWDAQTVSE SVRKTGRLLI NHEAPQTGGF ASEISATVQE RCFLYLESPI TRVCGLDTPY PLAHEKEYMP DRLKTYEAIK RCVNF
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