| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2036 |
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| Symbol | |
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| ID | 4173910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2479780 |
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| End bp | 2480976 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055044 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (lipoamide) |
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| Protein accession | YP_661608 |
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| Protein GI | 109898353 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGACG AAAGAAATCA TCTCTCGGAT GTGGGGATCA GTCACAAGGT TAATGTTATT
GATAAAGGCA CGGTTGATAT CCCTATGCTG CAAATATTGC GGCCAGATGG CAGTGTGCAC
AGTGACGCAG ACATGCCTGA AATTCATAAA GAGGCAGCGT TAAAGATTTT CAGAACTATG
CACTATATAC GCGTTCTGGA TGAGCGAATG GTCGGGGCTC AGCGCCAAGG TCGTATCAGT
TTTTATCTAG CGTGCAGCGG CGAAGAAGCA TCTACCATAG GGAGTGCAGC AGCCCTGAGT
GATAGCGATA TGATAATGTC GCAATATCGT GAGCAAGGCG CATTAGCCTA TCGAGGTTAT
CGTACTGAAC AATTCATGAA TCAGATGTTT AGTAATAAAC TTGACCCTAA CAAAGGTCGC
CAGATGCCGA TTCACTATGG TGATAAAGCC CTTAACTTTA TGACCATATC ATCACCATTA
GGTACGCAAA TTCCCCAAGC AGCAGGTTAT GCCTATGGCC AAAAAATGGC AGGAAATGAA
GCCTTAACCA TTTGTTATTT TGGCGAGGGC GCCGCTTCTG AAGGGGATTT TCACGCCGGC
CTGAACATGG CTTCGGTGTT AAATTGCCCC GTAATCTTCT TTTGCCGAAA TAATGGCTAC
GCGATTTCGA CACCGGCCAA TGAACAGTTC AGCGGTGATG GTATTGCATC TCGCGGATTA
GGTTATGGCA TCAAAACGAT TCGAGTCGAT GGTAATGATG TACTTGCCGT ATACCTCGCA
ACACAAAAAG CCAGGGAAAT AGCCCTTAAA GAGCATTGCC CAGTATTAAT TGAGGCCATG
ACGTACAGAT TGGCGGCGCA CTCTACGTCA GACGATCCAA CGGGTTATCG CTCAAAAGAA
GAAGAACAAA AATGGCGCGA GAAAGACCCA GTTCAACGCT TCGAAAACTG GATGAAAAGC
AAAGATTGGA TCGACGAAGC GCAACACAAG CAATTTGTTG AACAAACCCG TCAAGACGTG
CTCGCTGCAA TGAAAAAAGC GGAGCAAGTC GATATTTGTG ACATTGATGA TTTGATTAAC
GATGTGTATG ACGCCCCCCC TTGGCATTTA AAGGAGCAAT TGAGCCAATT GAAACAACAC
ATCAGTTTGT ACCCAGAAGC GTATCCGAAA ACAGCTGGGA GGATCCGCCA TGACTAA
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| Protein sequence | MVDERNHLSD VGISHKVNVI DKGTVDIPML QILRPDGSVH SDADMPEIHK EAALKIFRTM
HYIRVLDERM VGAQRQGRIS FYLACSGEEA STIGSAAALS DSDMIMSQYR EQGALAYRGY
RTEQFMNQMF SNKLDPNKGR QMPIHYGDKA LNFMTISSPL GTQIPQAAGY AYGQKMAGNE
ALTICYFGEG AASEGDFHAG LNMASVLNCP VIFFCRNNGY AISTPANEQF SGDGIASRGL
GYGIKTIRVD GNDVLAVYLA TQKAREIALK EHCPVLIEAM TYRLAAHSTS DDPTGYRSKE
EEQKWREKDP VQRFENWMKS KDWIDEAQHK QFVEQTRQDV LAAMKKAEQV DICDIDDLIN
DVYDAPPWHL KEQLSQLKQH ISLYPEAYPK TAGRIRHD
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