| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2034 |
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| Symbol | |
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| ID | 4173908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2476970 |
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| End bp | 2478199 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055042 |
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| Product | aminotransferase AlaT |
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| Protein accession | YP_661606 |
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| Protein GI | 109898351 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACTT TCAATAAATC TAAAAAGCTC GATAATGTTT GTTATGACAT TCGTGGTCCC
ATTCTAGAGC AAGCACAAAA AATGGAAGAC GAAGGTCACC GTATTTTGAA GTTAAATATT
GGCAATCCGG CACCTTTTGG CTTTGAAGCT CCCGATGACA TTTTAAAAGA CGTTATCCAT
CATTTACCTA AATCCCAAGG TTACTCTGAT TCAAAGGGGA TTTACCCTGC TAGGGTTGCG
GTGATGCAGT ACTACCAGCA ACAACGCATT AAAAACATCT CAGTTAACGA TATCTACATT
GGTAACGGTG TGAGCGAGCT TATTGTCATG GCGATGCAGG CGTTATTAGA TAATGGCGAC
GAAGTACTTC TCCCTAGTCC TGACTATCCG TTGTGGACGG CATCGGTCAG CCTGTCATCA
GGTAAGCCTG TTCACTATCG CTGTGACGAA AATGCTGATT GGCAGCCTGA TATAGAAGAT
ATCAAGAGTA AGATCACCGA GAACACCAAA GCGATTGTAT TGATCAATCC CAATAACCCG
ACAGGGGCGG TTTACAGTAA AGCATTGCTT TTACAGGTGA TCGAAGTGGC GCGTGAGCAC
GGCTTAATGG TCTTCAGTGA TGAAATTTAC GACAAAATTT TGTACGACCA AGCTAAGCAC
CAGTGTATAG CTGCGCTGGC AGACGATATT TTCTTTATCA CCTTAGGTGG CCTGTCCAAA
AACTACAGAG TAGCCGGTTT TCGCGCTGGT TGGTTAGTAG TAAGCGGGCA TAAAGCGTTA
GCCAGCAATT ATATTGATGG CTTAAATATG TTGTCTTCAA TGCGCATGTG CGCCAATGTT
CCAAGTCAAC ATGCGATACA AACGGCACTG GGTGGGTATC AAAGCATCAA TGATTTAATT
GTTGATGGCG GGCGCTTAAA GCAGCAGCGA GACCTTGCTA CTTCGATGCT TAACCAAGTA
GACGGCCTCG AATGCGTGGC ACCTATGGGG GCTATGTACT GCTTTGTTAA GGTGGATGCT
CAGAAGTTTA ATATCACCAG TGATGAACAA ATGATCATGG ACTTACTGCG CAGCGAAAAA
GTACTGCTTG TGCACGGCAA CGCCTTTAAT TTGACCCATG GCTGTTATTT CCGTTTAGTC
TTCTTACCCC ACGTTGATGT GCTGCGCCCT GCCATAGAGC GTATCGCCAA TTTCTTTAAA
CACTATCGTC AGGCAGACCC GTTATTATGA
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| Protein sequence | MRTFNKSKKL DNVCYDIRGP ILEQAQKMED EGHRILKLNI GNPAPFGFEA PDDILKDVIH
HLPKSQGYSD SKGIYPARVA VMQYYQQQRI KNISVNDIYI GNGVSELIVM AMQALLDNGD
EVLLPSPDYP LWTASVSLSS GKPVHYRCDE NADWQPDIED IKSKITENTK AIVLINPNNP
TGAVYSKALL LQVIEVAREH GLMVFSDEIY DKILYDQAKH QCIAALADDI FFITLGGLSK
NYRVAGFRAG WLVVSGHKAL ASNYIDGLNM LSSMRMCANV PSQHAIQTAL GGYQSINDLI
VDGGRLKQQR DLATSMLNQV DGLECVAPMG AMYCFVKVDA QKFNITSDEQ MIMDLLRSEK
VLLVHGNAFN LTHGCYFRLV FLPHVDVLRP AIERIANFFK HYRQADPLL
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