Gene Patl_2032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2032 
Symbol 
ID4173906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2476051 
End bp2476644 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content35% 
IMG OID638055040 
Producthypothetical protein 
Protein accessionYP_661604 
Protein GI109898349 
COG category[R] General function prediction only 
COG ID[COG1896] Predicted hydrolases of HD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAA GTAAATTTAT GGCATGGATA ACGCGAATGC CATTGTTAGA ACGTTGGGCG 
TTAATGCACT GCTTTCAATC AGAAAATGTT TCTGAACATT GTCATCAAGT AGCGGTTATT 
GCTCATTTAT TGACTGTCAT CAAGAATAAA CGTTTTGGTG GTAATTTGAA CCCAGACAAA 
GCGGCTACTT TAGCTTTATA CCACGAGGTA TCGGAAACAA AGCTACAGGA CATGAACTCT 
AATACAAAAT ACCATAATCC AGAATTTACG AAAGCATATA AGAAACTTGA AGAATTAGCA 
GAAAAGGAAT GTTTAGCCTC ACTCCCAGAA GATTTACAAA GTGAAATGGA GCCTTTAATT 
GTTCAATCAA AAGTAGATCC TGAATACAAA AGTATAGTTA AAGCAGCAGA TATCATCCAA 
GCTTATGTGA AAACTCAAAA TGAACTCCGT TTCAATAATG ACGAATTCCA GCACGTAAAA 
GTTAAATTGG ATAAGAAGCT TTTAGAACTT CAAGAAGACA TGCCCGAAGT CAAATGTTTC 
ATTGAAATAT TTTTGGATAG TTGCACTTTG ACTTTAGATA AGCTTTCTAC ATAA
 
Protein sequence
MDQSKFMAWI TRMPLLERWA LMHCFQSENV SEHCHQVAVI AHLLTVIKNK RFGGNLNPDK 
AATLALYHEV SETKLQDMNS NTKYHNPEFT KAYKKLEELA EKECLASLPE DLQSEMEPLI 
VQSKVDPEYK SIVKAADIIQ AYVKTQNELR FNNDEFQHVK VKLDKKLLEL QEDMPEVKCF 
IEIFLDSCTL TLDKLST