| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2005 |
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| Symbol | rlmL |
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| ID | 4173879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2444192 |
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| End bp | 2446297 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055013 |
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| Product | 23S rRNA m(2)G2445 methyltransferase |
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| Protein accession | YP_661577 |
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| Protein GI | 109898322 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase
[COG1092] Predicted SAM-dependent methyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.391349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAT TTTTAGTCAC CACGTCCAAA GGGCTCGATG AGCTGCTTGC CCAAGAAATA
ACGAAGTTGT GTCCACAACT GTCTGTAAAA ACCAAACCTG GCCAAGTGCT GTTCACCGGT
GAGATCGAAC AAGCATATAA AATTTGCTTG TGGTCACGCC TTGCGAACAG GGTGATGTTG
AAATTAGCCG ATGGCCATGT AGACAGCGCG GATGATGTAT ATCAAATTAC TAGCAGCGTA
AACTGGACAT CGCACTTCAG CGTGAATAGT ACATTTGTCG TTGATTTCGT CGGCGCGAGT
CATTGCATTA ACAATAGCCA GTTCGGGGCG TTGAAAATTA AAGATGCGGT GGTAGACCAA
TTTAATGAAT TATTTGAGTC GCGGCCCTCA GTGAGCAAAA TAGAGCCCGA TATTCGTATT
CAAGGGCGAA TGTGGAGCGA CAAGTTGACT GTGTATTTAG ACTTGTCAGG TTCAAGTTTA
CACCAACGCC ATTACCGTAC CAAAACTGGT TTGGCCCCTG TTAAAGAGCA TATCGCGTGC
GCTATGTTGG TTCGCAGCGG ATGGGCCAAT GATCAGCAAG CGCCATTAGT TGACCCTATG
TGCGGTGCGG GCACTATTGC TATTGAAGCA GCGTTAATGG CAGCCAATAT TGCCCCTGCA
CTTAAGCGTG AACGATGGGG TTTTACCCGT TGGTTACAGC ACGATGCGAC GTTGTGGCAG
TCATTATTAG ACGACGCAAA CGCTCAAATT ATTACCCCTA ACTGTGTGAT TAGCGCCAGT
GACATTGATC ATGGTGTTGT GTCGATAGCG AAAGAAAATG CGGATGCAGC AGGGGTTTTC
TCTGGGATAA AATTTAACAC CATAGATGCC TGCAAAGTTA TTCCACCTAA AGGACACACC
AAAGGTTACA TTGTGAGTAA CCCTCCTTAT GGCGAGCGCT TGAGCGAAAT AACAGCGCTG
TTACCGTTAT TTCAGGCGTG GGGAACAAGT CTTAAAGAGC ATTTTAAAGG TTGGAACTTA
TCTCTATTAA CGTCTAATCG AGATTTGTTA CGCAGCATGA AGATGTTTGC TCACAAAGAA
TACAAGTTAA TGAATGGCAA ACTTGAGTGT CAGTTAGTCA ATTTCGCTTT GGATGAAAAA
AACTGTATTA CCCGTGAAAC AAGTCTGAGT AATAATGATT TCGCGAATCG TTTGAATAAG
AACATCAAAC GTTTGAGCAA ATGGCTCAAA AGTGAGAATA CAAATTGTTA CCGTATTTAT
GATGCTGATT TGCCAGAATA CAACGTCGCT ATTGACCGCT ATGGTGATTG GTTGGTCGTA
CAAGAGTATG CTGCACCAAA AAACGTACCT GAAGCCAAGG CGAAACGCCG GTTGCATGAA
GTGATTGTGG CATTGCCGCA AGTCGTTGAT GTACCAGCTG AACAAATTGT CATGAAGGTA
AGAGCGCAGC AAAAAGGTAA GAGTCAGTAC GAAAAGGTAT CGCAAAAACA AAAAATGCTG
GAAGTGTTTG AAAATGGTGC CAAATTCAAG CTGAATCTGA CCGATTACCT TGATACCGGT
TTGTTTTTAG ATCACCGAGT AACACGTCAA CTTGTGCAGC AACGGGTTAA AGACAAGGAC
GTTCTAAATT TGTTTGCCTA CACAGGCAGC GTTTCCGTGC ATGCAGCGTT GGGTAAGGCA
AAGTCAGTTA CCACGGTAGA TATGTCAAAT ACCTATGTGG ATTGGGCGAA AGAAAACTTT
GCTTTAAATA AGCTAAAAGG GCCTTATGAA TTTATTCAAG CTGACTGTTT AACCTGGCTT
GAGCGCCACA ACAATCAATA TGATTTTATC TTTATAGATC CACCGTCGTT TTCTAACTCA
AAGCGTATGG ATACGACGTG GGATGTACAA CGTGACCACG TGGCGCTTTT ACGTAACGCG
GTTAAATGCT TGCGCCCAGG TGGAGAGATC ATGTTTTCAA ATAACCTGCG CCAGTTCAAG
TTAGATGAAG AGGGCGTAAG TCAATTAGGC TTAACAATTC AAGATATAAC CCAAAAAACA
CTGCCGGAAG ATTTTAAGCG TAACCCTAAA ATTCATGGCT GCTGGGTATT AACACTTAAT
GCGTAG
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| Protein sequence | MFEFLVTTSK GLDELLAQEI TKLCPQLSVK TKPGQVLFTG EIEQAYKICL WSRLANRVML
KLADGHVDSA DDVYQITSSV NWTSHFSVNS TFVVDFVGAS HCINNSQFGA LKIKDAVVDQ
FNELFESRPS VSKIEPDIRI QGRMWSDKLT VYLDLSGSSL HQRHYRTKTG LAPVKEHIAC
AMLVRSGWAN DQQAPLVDPM CGAGTIAIEA ALMAANIAPA LKRERWGFTR WLQHDATLWQ
SLLDDANAQI ITPNCVISAS DIDHGVVSIA KENADAAGVF SGIKFNTIDA CKVIPPKGHT
KGYIVSNPPY GERLSEITAL LPLFQAWGTS LKEHFKGWNL SLLTSNRDLL RSMKMFAHKE
YKLMNGKLEC QLVNFALDEK NCITRETSLS NNDFANRLNK NIKRLSKWLK SENTNCYRIY
DADLPEYNVA IDRYGDWLVV QEYAAPKNVP EAKAKRRLHE VIVALPQVVD VPAEQIVMKV
RAQQKGKSQY EKVSQKQKML EVFENGAKFK LNLTDYLDTG LFLDHRVTRQ LVQQRVKDKD
VLNLFAYTGS VSVHAALGKA KSVTTVDMSN TYVDWAKENF ALNKLKGPYE FIQADCLTWL
ERHNNQYDFI FIDPPSFSNS KRMDTTWDVQ RDHVALLRNA VKCLRPGGEI MFSNNLRQFK
LDEEGVSQLG LTIQDITQKT LPEDFKRNPK IHGCWVLTLN A
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