Gene Patl_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2004 
Symbol 
ID4173878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2443520 
End bp2444056 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content41% 
IMG OID638055012 
Producthypothetical protein 
Protein accessionYP_661576 
Protein GI109898321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0401483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACTTC CGAACACGAA CTGGTTTTGG TATACACATG AAAATGAATT GCGTCTTGAC 
TTAGGTGACA CACTGACCTT TGTTGCGCCC TTTGCATTAA AAAACTTAGT CAATCTTCCC 
AGCGATAAAC AATTGTTCAG TTTAGAAGAC ACTGAGCATT ACGTGGCACT AGCTGAAAGC 
CTAGACAATA GTGGACTCGA GTTATCAGAC GGTGAGTTGG TTCAAATACT ATTGAATGCG 
ACTGCAGCCC TTAAGTTTCA TAAACCTATA GGGATGAAAA GCTGGTTGTA TAAAACACAA 
AGCACCAGTG GTGTACATTA TCAATTGGCC TTGCTTGAGC CTACTGATAC TGCATACCCT 
GAGTTAGGCC AAGTCATTGT GATTGAGCAA GATGGTGCCT GTGCCACGTG TATGTTGATA 
TCAAACGAAT TTGCAGTAAA TAGCAGCAAA AAGTTCTCTA AGTTTGAAAT GATTAAGGTA 
ATGAATGACC GTCTTATCCC TTGCTTAGTG GATATTCCTG TATACAAACG CGCTTAG
 
Protein sequence
MLLPNTNWFW YTHENELRLD LGDTLTFVAP FALKNLVNLP SDKQLFSLED TEHYVALAES 
LDNSGLELSD GELVQILLNA TAALKFHKPI GMKSWLYKTQ STSGVHYQLA LLEPTDTAYP 
ELGQVIVIEQ DGACATCMLI SNEFAVNSSK KFSKFEMIKV MNDRLIPCLV DIPVYKRA