| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2003 |
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| Symbol | |
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| ID | 4173877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2442397 |
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| End bp | 2443404 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055011 |
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| Product | dihydroorotate dehydrogenase 2 |
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| Protein accession | YP_661575 |
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| Protein GI | 109898320 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0557118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGCCA TTTTACAGAA ATTTCTTTTC ACCCAAGACG CTGAGTGGAG CCATGATTTC
ACGATCAACT GGCTCAAGCG AACACAACAT AATTTTTTGA ACGTGGCTTA CAAACAACAT
ATTGATGACA AGCCTGTGGA ATTCCTTGGC ATAACGTTCA AGAACCCAGT TGGTCTAGCC
GCAGGGCTAG ATAAAAACGC AGAGTGCATT GATGCATTTG CCGCAATGGG ATTTGGTTTT
ATAGAAGTAG GAACGGTCAC GCCGAAGGCG CAAGCAGGTA ATGACAAACC AAGAATGTTT
AGATTGCCAG CAGGGCAGGC GATCATTAAT CGTATGGGCT TTAACAACAA AGGGGTTGAT
TATTTAGTTG AGCAAGTGAA GCAAGCTAAA TACAAGGGTG TCCTAGGGAT CAATATAGGC
AAAAACAAAA CCACGCCTGA AGATGAAGCG CTAAATGATT ATTTGATCTG CTTACGCAAA
GTGTACGCCC ATGCGAGTTA CGTCACCGTT AACATCTCAT CTCCGAACAC ACCTGGCTTA
CGAAACTTGC AATACGGGGA CGCTTTAACC CAATTATTGG AAGGTTTAAA AGAAGAGCAG
GCCAACCTAG AAGTAAAACA CAATAAGCGT GTGCCTATCC TTATTAAGAT CGCTCCCGAT
CTAGAGGATT CTGAATTAGA TTCTATGGTT GATTCATTTT TAACCGTCGG GATCGATGGC
GTGATCGCAA CGAACACTAC GCTCGATCGA GATAGGGTAA AGGGTCAAGA ACACGCCGAG
GAAGCTGGTG GTCTAAGTGG GTCAGTACTT ACTGACAAAA GTCAGCAGAT CGTTAGCTCG
TTATGCACCA AGCTCGCTGG TAACGTGCCT GTGATAGGCG TTGGGGGAAT TGATTCACCA
CATGCAGCCA AGGCGCGGAT CGAAGCGGGA TCACCTTTAA TTCAAGTGTA TTCTGCGCTG
ATCTACCAGG GGCCAAAATT AATAAAAGAG ATCGTGGACT CGTTATAA
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| Protein sequence | MYAILQKFLF TQDAEWSHDF TINWLKRTQH NFLNVAYKQH IDDKPVEFLG ITFKNPVGLA
AGLDKNAECI DAFAAMGFGF IEVGTVTPKA QAGNDKPRMF RLPAGQAIIN RMGFNNKGVD
YLVEQVKQAK YKGVLGINIG KNKTTPEDEA LNDYLICLRK VYAHASYVTV NISSPNTPGL
RNLQYGDALT QLLEGLKEEQ ANLEVKHNKR VPILIKIAPD LEDSELDSMV DSFLTVGIDG
VIATNTTLDR DRVKGQEHAE EAGGLSGSVL TDKSQQIVSS LCTKLAGNVP VIGVGGIDSP
HAAKARIEAG SPLIQVYSAL IYQGPKLIKE IVDSL
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