Gene Patl_1998 details

Gene Information

• Locus tag: Patl_1998
• ID: 4173872
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 2430380
• End bp: 2432446
• Gene Length: 2067 bp
• Protein Length: 688 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638055006
• Product: hypothetical protein
• Protein accession: YP_661570
• Protein GI: 109898315

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000875403
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCGTG AATTCTTCGG GTTTAAAAAG TCGCCTATAG CGTTAGGTGT GATGGGGCTT 
ATGGGCGCAG CAATGATGCC AGCGCAAGCC GCCAGTTGGA GTGATGGCGA TTGGTCAGTT 
ACCTTTGACT CGAACTTTTC TTTGGGTACC AGCATTCGTG TTGAAGAGCG CGATTTCTCA 
CGCGTGGGTA ATAGTAACGG TGTACAGTTT GATTGGACAG GTTATAACCC TGCTACCAAT 
CCTATTTACA GCTCAGCTGA CGTGTGGGCA TTAGGTACAG GTGGTTACTC GACAAATGGT 
GACTTAAGCA CCCTGAACTA CGAAAAAGGA AACCCATTTT CGACGCTGTT CAAAGGCGTG 
CATGAACTTG ATATCCAATA CAAAAACATG GGCGTTTTCA TGCGTGGAAT GTATTTCTAC 
GACTTTGAAA TGAAAGATAG TTCGCGGGAT TGGCAGAATC CGATTACAGG TAAAACACAA 
GACCCTTGTG CTTCGTCTAC CGCTAATGAT GAACTATGTT CAGATGTACG TTTGTTAGAC 
GCCTACTTCT ACTCTGATTT CTATATCGGC GATATGCCGG TCACATTCCG AGTGGGTGAC 
CAAGTGGTGA GCTGGGGTGA AAGTACGTTC ATTCAGCATG GTATTAACTC AACCAACCCT 
GTGGATGTCT CTCGTGCTCA AGCACCAGGT GCTGAGCTTA AAGAAGTCTT TATTCCAGTG 
GGGATGGTAT TCGCTCAGTT TGGTTTGACC GAAAATTTAA GCTTGTCTAT GTACTACCAG 
TATCAGTGGG AGCGTAGCCG ATTACCACAA GCAGGTAGTT ACTTCGCTAC CAATGACTTT 
GCTGGCGAAG GCGGTCAAGC GCAGAATATC CAGTTAGGTT TTAGTGGTAA CCCTGATATC 
GATTTGGATT TCTTGTTATC AAGTTTGAAC GGGCTTGGAG ATTTACTACG AAGTGGTGCT 
GATGCAGCTC AAATAGGTCA GGCCTATTTA GCTTATCCAA CTAAAGTGGC TGTGCGTGGT 
TATAGTGATT CCGCACATGA AGATGCAGAC GACCAAGGTC AGTATGGGAT AAAAATTGGT 
TACTACGCAG AAGACTTGAA CGAAACTGAG TTCAATTTCT ATATGCTTAA CTACCACAGC 
CAACGCCCAT TAATCTCTGG GTTAACGTCT GATTTTACTT CTGCAAGTAT TGCCGCTGAT 
CTTGGTATGT TGGCCACAAC TGAAATCACT AAAGACAATG TAACAGACCT TAAAGCTTTC 
ACGAAAACAG GCTTTGTTTA TCCTGAAGAC TTGAAACTGT ATGGCTTTAG TTTTAACACC 
AATGTAGGTA CAACAGCTCT TGCGGGGGAA ATCGCGTACC GTGTTGATGA ACCTCTGCAG 
ATAGATGACG TTGAACTGTT GTATGCTGCG ATGCCACAGC AATTAGCGAT TGCGGGTTTA 
CGTCCTGATT TAGCGGGTAT TTCTCAACTA GACGGATATC AAGGATTTAC AACGGGGCCT 
GGGGAAACGG CAACGGGCTA CATTGAGTCT GATACATTGC AAATGCAAGT CACAGCAACA 
CATATTTTTG GCCCTGCTTT GGGTACGGAT AATTTAGTGG TGTTGGGCGA AGTTGGGTAT 
GTCAGCATTC AAGACTTCCC GGATCCAAAT GTTATTCGAC TAAATGGTCC TGGTTCTGTG 
CGTACGCCTT CGCTTGAGCC AACAGCGGAT GGTAACACCC GAGAAGGTTT GCATATTGGT 
CTGTCTGATG GCCCAGAAAC AAACCCATTC CCAACGTCGA GTGCTTGGGG ATACCGCTTA 
CTGGCTAATG CGTCATTTAA CAACGTTTTC GCTGGTATTA ATCTGCAAGC ACGTGGCACC 
TTTGCACATG ATGTAAATGG TATTACGCCT GATCCATTAT TCTTATTTAT CGAAGATAGA 
AAATCAGCTA GCGCGTCATT AACGTTTGAT TATTTAAGCA AATGGTCAGC AACGGCTTCT 
TATAACACGT TCTGGGGCGG TCAAGGCACC ACCAACCAGC TGTCGGATCG TGATTATGTC 
TCTTTTAACA TCAAGTATTC TATCTAG 

 

Protein sequence

MSREFFGFKK SPIALGVMGL MGAAMMPAQA ASWSDGDWSV TFDSNFSLGT SIRVEERDFS 
RVGNSNGVQF DWTGYNPATN PIYSSADVWA LGTGGYSTNG DLSTLNYEKG NPFSTLFKGV 
HELDIQYKNM GVFMRGMYFY DFEMKDSSRD WQNPITGKTQ DPCASSTAND ELCSDVRLLD 
AYFYSDFYIG DMPVTFRVGD QVVSWGESTF IQHGINSTNP VDVSRAQAPG AELKEVFIPV 
GMVFAQFGLT ENLSLSMYYQ YQWERSRLPQ AGSYFATNDF AGEGGQAQNI QLGFSGNPDI 
DLDFLLSSLN GLGDLLRSGA DAAQIGQAYL AYPTKVAVRG YSDSAHEDAD DQGQYGIKIG 
YYAEDLNETE FNFYMLNYHS QRPLISGLTS DFTSASIAAD LGMLATTEIT KDNVTDLKAF 
TKTGFVYPED LKLYGFSFNT NVGTTALAGE IAYRVDEPLQ IDDVELLYAA MPQQLAIAGL 
RPDLAGISQL DGYQGFTTGP GETATGYIES DTLQMQVTAT HIFGPALGTD NLVVLGEVGY 
VSIQDFPDPN VIRLNGPGSV RTPSLEPTAD GNTREGLHIG LSDGPETNPF PTSSAWGYRL 
LANASFNNVF AGINLQARGT FAHDVNGITP DPLFLFIEDR KSASASLTFD YLSKWSATAS 
YNTFWGGQGT TNQLSDRDYV SFNIKYSI