| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1995 |
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| Symbol | |
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| ID | 4172130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2425734 |
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| End bp | 2427254 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055003 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_661567 |
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| Protein GI | 109898312 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00594855 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGGAAA ATACAACAAT AAAACAAAAG AAAGAGCCTA GTTTATTAGA TGCCCTTATT
CCATTACTGG TTCTAGTGAC ATTATTGAGT ACATCGGTAT TTTTGTTTTC TGATAACTCA
TCGTTTGGCC CGAATCAGAT TGCCTTACTT TTTTCTATGG GTGTCGCAGC TGTTATTGGT
TTAAAAAACG GCTATACCTG GACGGAAATT GAGCAAGGCA TCGTAAAAGG GATTTCATTG
TCCCTTGGGG CGATACTGAT CCTATTAGCC GTGGGGGCAC TCATTGGGAC GTGGATGTTG
TCAGGCACAG TACCTACACT TATTTATTTT GGTTTAGAAC TGTTAAATCC TTCATTCTTT
TATGCCGCAA CTTGCTTGAT ATGTGCCATT GTCGCCATGA GTATCGGCAG TTCTTGGACA
ACAGCTGCAA CCGTTGGTGT TGCTCTGATG GGCGTAGCGT CAGGAATGGG GATGTCTGAT
GCGGTAACCG CAGGTGCGGT TATATCGGGC GCCTATTTTG GGGATAAGAT ATCGCCGTTG
TCGGAGACCA CCAACCTTGC GCCAGCTGTC GCTGGAACTG AACTATTCGA GCATATCCGC
TACATGCTGT GGACGACTGT CCCGAGTTTT GTCATAGCCT TAATTCTGTT TACGATAATT
GGATTTTCTG GCGCTGAGTC AGACACATCG AGCAACATCG AACAAATGCA AACCTTGCTT
GCTCAAGAGT TTAATATCAG CTGGGTGATG CTAGTGCCTT TAGTCGTTCT ATTGACCTTA
GCCATTAAAA AAATGCCAGC TTTTCCAGCG GTCGCCATTG GTGCTCTGTT GGGTGGTTTG
TGGGCAGTGA TATTTCAACC TGATGTAATA CAGAGTATGT TTGATGAAAG CCAACAGGGC
GTTTTGGGTG TAGCGTCTGT GGTGTGGACT TCGTTATTCG ATGGCGTTGC ATTTACCACA
GCCGATGAAA ATCTAAATGC GCTACTTAGT CGCGGTGGTA TGTCAAGCAT GCTAAATACC
ATTTGGCTAA TTATCTGCGC TATGAGTTTT GGTGCGGTGC TCGAGCGTAC TGGATTATTA
AAAGCGGTTG TTGCGCTGTT TTTACGTGGT GCTAAATCTG CTGGCAGTAT GATTAGTCGT
ACTATTTTGA CCTGTATCGG CACCAATGTA ATCACTGCTG ATCAGTATAT TTCTATTGTG
ATGCCAGGTC GTATGTATAA AGAAGAATAT GCTAAACGTG GTTTACATCA GTTAAATTTA
TCTCGCAGTC TGGAGGATGG CGGCACAATT ACCTCGCCAC TCATACCTTG GAATACCTGT
GGTGCCTATA TGCAAGGCGT GTTGCTTGTG CATCCTTTTG ATTATTTCAT GTATACGTTC
TTTAATTTGA TTAACCCAGT ATTGGCAGTT ATTTACGCCT ATCTTGGGGT GAAAATATTG
CGTATTCCCA TTCCTGAAGT AGCGGTTGAA GTTGGCGACG AACAAGTGCC CGTGCATCAA
GCTACCCAGA CAAAAATCTA A
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| Protein sequence | MMENTTIKQK KEPSLLDALI PLLVLVTLLS TSVFLFSDNS SFGPNQIALL FSMGVAAVIG
LKNGYTWTEI EQGIVKGISL SLGAILILLA VGALIGTWML SGTVPTLIYF GLELLNPSFF
YAATCLICAI VAMSIGSSWT TAATVGVALM GVASGMGMSD AVTAGAVISG AYFGDKISPL
SETTNLAPAV AGTELFEHIR YMLWTTVPSF VIALILFTII GFSGAESDTS SNIEQMQTLL
AQEFNISWVM LVPLVVLLTL AIKKMPAFPA VAIGALLGGL WAVIFQPDVI QSMFDESQQG
VLGVASVVWT SLFDGVAFTT ADENLNALLS RGGMSSMLNT IWLIICAMSF GAVLERTGLL
KAVVALFLRG AKSAGSMISR TILTCIGTNV ITADQYISIV MPGRMYKEEY AKRGLHQLNL
SRSLEDGGTI TSPLIPWNTC GAYMQGVLLV HPFDYFMYTF FNLINPVLAV IYAYLGVKIL
RIPIPEVAVE VGDEQVPVHQ ATQTKI
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