| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1972 |
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| Symbol | |
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| ID | 4172107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2395790 |
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| End bp | 2396323 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054980 |
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| Product | prepilin-type cleavage/methylation |
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| Protein accession | YP_661544 |
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| Protein GI | 109898289 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTGC CCAACTCGAT AAAGCCAAGT GCGCAAAGTG GATTTACTTT GATTGAGCTA
ATCATCGTCA TCGTTATCTT GGGGACATTA GCCGTCACAG CTGCACCAAA GTTTCTCGAT
TTAAACGGTG ATGCGAAAAT TGCTGTGCTT GAATCTGTAG GGGGCGCAAT GTTGTCTGCT
AGCAAGTTGG TATATGCTAA ATCAGCGATT CGAGGGCAGA ATAGTTTGCA GCTTAGCAAT
ATTGATATTG ACGGTGACGG TTCTTCGGAC ATCGAAACAC GATATGGATA CCCAAGTGGC
TCTCGAAATA GCGGAATTTC TGCGGCAATG AGCAGCAATT TTGAGAAAGA TTGGATATGG
TCAACAGATT ATCGACGGAC TAAATTATAC CTTACTTTTG CGTCGCTCAC CCACACGTCA
GGTGCCTATG TAAACCAAGT ACCGATAGTT GCCACCAATT GTTATTTGAT CTATTACCGT
GCAGAAAACT TGGGGGAAAC CCCTAGCATA GAATACACGA CTTCAGGTTG TTAA
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| Protein sequence | MNLPNSIKPS AQSGFTLIEL IIVIVILGTL AVTAAPKFLD LNGDAKIAVL ESVGGAMLSA
SKLVYAKSAI RGQNSLQLSN IDIDGDGSSD IETRYGYPSG SRNSGISAAM SSNFEKDWIW
STDYRRTKLY LTFASLTHTS GAYVNQVPIV ATNCYLIYYR AENLGETPSI EYTTSGC
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