Gene Patl_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1962 
Symbol 
ID4172097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2377787 
End bp2378914 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content46% 
IMG OID638054970 
Productpeptidylglycine monooxygenase-like 
Protein accessionYP_661534 
Protein GI109898279 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.217601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTTA TAGATTCTCA GAAATTTAAT CACAAAAGCC CCCAAGGGGA TAAGTTGCAA 
TCAGGTTGGG TGCTGCCTAA ATCTAAACGT GACCCACATG GAATGATAGT GGGGCAAGGG
CAGTTTAGGT ATCGAGTTAA TGCCTATTGG GGGCGACTTG ATAATAGCCA AACACCGGTT
GAGAACTGCC ACGGTCTTGA TATCGATGCT AAAGGGCGAG TGGTGATGAT AACTGACGAC
CCGCGCAATA ATATCGTGAT TTACAATCGC GATGGCAAAC TGATCGATAC CTTCAGCACA
CATATGCCAG GCGGCCACAG CATCAAAATA GTCAATGAGA ATGGTGAGGA CTTTATGTAT
CTCGTTGATA GCGGCTGGGT GAAAAACCGC TTATGGGATG GCCATTCTAC TGAAGCATGG
GATTCGCCGT ATAATCGCGT TGTTGCCCAA TCTGGTTTTA TCGCGAAATT GGATATGGCT
GGGCGACTCA TATTCAGTAT TGGTCATCCT CAAACCTACG GCGTTTATCG ACCCGACCAA
CCTTTTAGGC CGACGGATAT TGCTATTAGT GATAATGGCG ATTTGTACGT TACTGATGGC
TATGGCTCTG ACTACTTACT TCAGTACGAT AACCAAGGGC GTTTTATTCG CCGTTGGGGC
GGCCACTATA ATATCGATGC AAACTACAAT CTATCGAATA CCCATGGTAT AGGCATAGAC
AAGCGTACAA ACACACCTGA GTTGATTGTT AGCTCCAGAG GGGCACAATG CTTAAAGCGC
TTCACCCTAA GTGGTGAGTA TTTAGGCACT ATTGATGCGA ATGGTGCCTA TATTGGCGGT
CCTATATTTA AGGGCGAGCA TTTCTATGCG CCGGTATGTT GGTCACATAT TGATGGTAAA
AACCAAGACG ATTCGGGCTT TATCAGCGTG TTTGATAAAG ACAACCGCGT GGTAGCGAAT
ATTGGCGGCA CTACACCTGA GTATATCAAC GATGTGTTAC AGCCGATGCA AACCACCTGG
GATGTGTTTA ACCATTGTCA CGGCTTATGC GTGGATGATG ACAGCAACCT TTACGTGGGC
CAATGGAATG CGAATCAGAG TTACCCCATG AAGCTAGAGC GCCTGTAA
 
Protein sequence
MPVIDSQKFN HKSPQGDKLQ SGWVLPKSKR DPHGMIVGQG QFRYRVNAYW GRLDNSQTPV 
ENCHGLDIDA KGRVVMITDD PRNNIVIYNR DGKLIDTFST HMPGGHSIKI VNENGEDFMY
LVDSGWVKNR LWDGHSTEAW DSPYNRVVAQ SGFIAKLDMA GRLIFSIGHP QTYGVYRPDQ
PFRPTDIAIS DNGDLYVTDG YGSDYLLQYD NQGRFIRRWG GHYNIDANYN LSNTHGIGID
KRTNTPELIV SSRGAQCLKR FTLSGEYLGT IDANGAYIGG PIFKGEHFYA PVCWSHIDGK
NQDDSGFISV FDKDNRVVAN IGGTTPEYIN DVLQPMQTTW DVFNHCHGLC VDDDSNLYVG
QWNANQSYPM KLERL