| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1948 |
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| Symbol | |
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| ID | 4172083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2364536 |
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| End bp | 2365519 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054956 |
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| Product | hypothetical protein |
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| Protein accession | YP_661520 |
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| Protein GI | 109898265 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.557873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCAAC CTCGAAAAAG CCAAATCAGT TTAGTCGATA CCCCTTATTA CCATTGTGTT
TCCCGGTGTG TGCGGCGTTC TTTCTTGTGT GGAGTAGATA AATACTCTGG CCAGAGTTAC
GAGCATCGCC GTGGTTGGGT AGAAGAGCGT TTGTTGTTTT TATCTACGGT ATATTCCATC
GACATTTGCG CCTATGCGGT CATGAATAAT CACACGCATG TGGTGCTATG TGTGGATAAA
ACAATGGCTG ATAATTGGGA TAGCGATGAA GTGTTGAGGC GTTATCACAA GCTACACAGA
GGCACTTTGC TGACTCAGAA GTTTATGAAT GGCGATACGC TGAGCCAAGG AGAGCTAATC
ACCTTTGATG AGACCGTTGA AACCTATCGG CAACGTTTGT ATGACATAAG CTGGTTTATG
CGTGACTTGA ATGAATATAT TGCTCGCGAA GCCAATAAAG AGGATGGCTG CACTGGTCGT
TTCTGGGAAG GACGATTTAA ATCACAAGCC CTATTAGATG AGAGTGCGGT CTTAGCGTGT
ATGGCCTATG TGGACTTGAA TCCCATTCGT GCAAAAATGG CAAAAACACC CGAAACGTCA
AAACACACCA GTATCAAAAA GCGCATTCAC GCCATTAAAA ACCAACAACC ACAACCGAAC
GTGTTAATGC CGTTTGTAGG AAACCCTCGT GAAAATATAC CTCGAGGTAT CGCATATTCG
CTCAAAGACT ATTGTGAATT GGTAGACACG ACAGGCCGAT GCATTCGAGA TGATAAGGCC
GGTCATATTG ATAACACTCA CAGCCCTATT CTACAAAGAT TGGGATTAGA CTCTGCTCAG
TGGTTAACAT TAACCACGGA GTTCGAAAAA CACTTCTGCT ACGCAGCAGG TACGGAGCAA
ATGATGAATG CATTTAAACG CCATACCCAT CATCAACGTC TGCGAGGAAT GACCAAAGCG
AGAGAGTTGT TAAGGCGGGC TTAA
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| Protein sequence | MPQPRKSQIS LVDTPYYHCV SRCVRRSFLC GVDKYSGQSY EHRRGWVEER LLFLSTVYSI
DICAYAVMNN HTHVVLCVDK TMADNWDSDE VLRRYHKLHR GTLLTQKFMN GDTLSQGELI
TFDETVETYR QRLYDISWFM RDLNEYIARE ANKEDGCTGR FWEGRFKSQA LLDESAVLAC
MAYVDLNPIR AKMAKTPETS KHTSIKKRIH AIKNQQPQPN VLMPFVGNPR ENIPRGIAYS
LKDYCELVDT TGRCIRDDKA GHIDNTHSPI LQRLGLDSAQ WLTLTTEFEK HFCYAAGTEQ
MMNAFKRHTH HQRLRGMTKA RELLRRA
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