| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1932 |
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| Symbol | |
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| ID | 4172779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2339611 |
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| End bp | 2340843 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054940 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_661504 |
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| Protein GI | 109898249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGTGC AAAGTGAACA CAAAATGCGC ATTGCCATTG TGGGTGCAGG CATTATGGGG
CGAATGATGG CGTGGCAATT ATTACACCGC CAAGCGGATA TTTCGCTCAC CATATTTGAT
AAAGATCCCA TCGAAAGTGG CAGTGCTGCT GCGTATACAG CAGCTGGTAT GTTAGCACCG
TATAGCGAGC TTGAAAGTGC AGAGCTTGCT GTGTTTTCTA TGGGGATGGC GTCTTTAACG
CGCTGGCCGG ATGTTATTAA CAGCCTAAAT TTGCACTTGG CTAAACCACT CACGTTGTTC
GTTCAGGGCA CGTTAGTGGT GGCGCACCGC GAAGATAAAG CCGATTTTCA GCAGTTTTCC
CGCCAGTTAA TGGGTAAGTT GCCAGATTTC GCGCAAGATG AAGAGTTTTC ACATATGCAG
TTATTAACCC AAGCAGCGCT TCATCATTAT GCTCCGCAAT TAGCAAAACA CTTTGACGGC
GGACTTTATC TCCCGAACGA AGCATGGGTT GATACCGCTG AGGTGATGAC AGGCCTTGCA
TCCTACCTTG AGCAATCAGC TGTGACGTGG CAGTCAAACT CGCACGTGCT CAGGGTCGAT
AACGAACAGC GAAATAATAA TGGCAATAGC GCAGCGGTAG TCTTGCCTGA GGGAAAACAG
GTATTTGATT ATGTGATTGA CTGCCGCGGA CTTGGCGCAA AGCAAGTCCC ACTTGCTGAT
ACCCAAAGGC GGACTAAGTT CAACTACAAC GCCACTAAAC AGGAAACGTT CGGGCAGCAA
ATACCTGAGT TACGCGGGGT GCGCGGTGAA GTCATTACCC TATATGCGCC AGAGGTAGAG
CTTAAGCACG CAGTGCGACT GATGCATCCG AGATACAAGT TGTATATTGC ACCGCGGCAC
AACCATCATT TTGTGATTGG TGCGAGTCAA ATCGAAAGCG AAGATACTGG CCCAATCACA
GTGCGCTCGA CGCTTGAACT GCTGTCTGCA GCGTATTCCA TTGACGTGGG TTTTGGTGAA
GCAAAGATTG TACAAACTGC GACGAATTGT CGCCCAGCAT ACCCAGATAA CCTACCTAAA
ATATATTTTA ATCAGCGGGT TATACGCATC AATGGTCTAT TTCGTCACGG TTACTTGTTA
GCGCCCATAC TCGCTGAACA GGCGTGCGAC AGGTTGTTCA ATAGCGATTT CAAATCAACA
TTTGAGAACT TAATTCAGGA AGTAGCATGT TAA
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| Protein sequence | MAVQSEHKMR IAIVGAGIMG RMMAWQLLHR QADISLTIFD KDPIESGSAA AYTAAGMLAP
YSELESAELA VFSMGMASLT RWPDVINSLN LHLAKPLTLF VQGTLVVAHR EDKADFQQFS
RQLMGKLPDF AQDEEFSHMQ LLTQAALHHY APQLAKHFDG GLYLPNEAWV DTAEVMTGLA
SYLEQSAVTW QSNSHVLRVD NEQRNNNGNS AAVVLPEGKQ VFDYVIDCRG LGAKQVPLAD
TQRRTKFNYN ATKQETFGQQ IPELRGVRGE VITLYAPEVE LKHAVRLMHP RYKLYIAPRH
NHHFVIGASQ IESEDTGPIT VRSTLELLSA AYSIDVGFGE AKIVQTATNC RPAYPDNLPK
IYFNQRVIRI NGLFRHGYLL APILAEQACD RLFNSDFKST FENLIQEVAC
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