| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1915 |
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| Symbol | |
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| ID | 4172761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2318688 |
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| End bp | 2319608 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054923 |
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| Product | haloalkane dehalogenase |
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| Protein accession | YP_661487 |
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| Protein GI | 109898232 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATATT TACGCACCTC AGACGACTGT TTCGAAGGTT TGTCGGGTTA CTCGTTCGCG
CCTCATTATA TAGAAGTAGA CGATTTTGAA GGCGGCAACT TACGCATGCA CTACCTAGAT
GAAGGTAGCA AAGAAGGTGA AGTGGTCTTA ATGCTTCATG GTGAACCATC GTGGAGTTAT
TTATACAGAG ACATGATCAA ACCCATTGCC GATAAAGGCT ATCGGGTCAT TGCACCTGAC
TTAATTGGTT TTGGACGTTC TGATAAACCC ACCCAGCGCT GCGACTATAC TTACCAGCGG
CATCTCGATT GGATCCGTAA CATCCTTACA CAACTTAATT TAAAGCAAGT CACACTAGTC
TGCCAAGATT GGGGCGGCTT GCTCGGGTTG CGTTTAGTGG CTGAGCACCC AGAGTTGTTT
GCACGTGTAT TAGCAGCAAA CACTATGCTA CCCACCGGCG ATCATCCCCC AGGTGAAGCC
TTTATGAAGT GGCGCGCTTT TTCACAAGAA GTACCTGAAT TTCCGGTTGC AGGGATTATA
AAAGGCGCCA CAGTGACAGC GTTATCCACT GACGTACTAA ACGCTTACGA TGCGCCCTTT
CCTACTGAAG CGCACAAAGC AGGCGTGCGC CAATTCCCTT TATTGGTGCC TGCGACAACA
GACGACCCAC AAACGCAGAA CAATCGTAAA GCGTGGCAAG TTCTACAGCA ATTTAACAAG
CCTTTTATCA CGGCGTTCAG CGATAGCGAC CCGGTTACCG CTGGCGGCGA TAAAATAATG
CAAAAACTGA TCCCTGGCAC TCAAGGTCAG TCTCACACCA CGATCACGCA GGGCGGGCAT
TTTTTGCAAG AAGATCAACC ACAGCAGTTA GCGAAAGTAT TACTGCAATT TATTAACGAC
AACCCCATTT CAACAGATTA A
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| Protein sequence | MQYLRTSDDC FEGLSGYSFA PHYIEVDDFE GGNLRMHYLD EGSKEGEVVL MLHGEPSWSY
LYRDMIKPIA DKGYRVIAPD LIGFGRSDKP TQRCDYTYQR HLDWIRNILT QLNLKQVTLV
CQDWGGLLGL RLVAEHPELF ARVLAANTML PTGDHPPGEA FMKWRAFSQE VPEFPVAGII
KGATVTALST DVLNAYDAPF PTEAHKAGVR QFPLLVPATT DDPQTQNNRK AWQVLQQFNK
PFITAFSDSD PVTAGGDKIM QKLIPGTQGQ SHTTITQGGH FLQEDQPQQL AKVLLQFIND
NPISTD
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