| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1897 |
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| Symbol | metG |
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| ID | 4172742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2293695 |
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| End bp | 2295722 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054906 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_661471 |
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| Protein GI | 109898216 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0232375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTCAC AACCACGTAA AATTCTTGTT ACCAGCGCCC TTCCCTATGC AAATGGCTCC
ATTCACTTGG GTCACCTTTT AGAGCATATC CAAACGGATA TCTGGACGCG TTTTCAACGA
ATGTGTGGCC ACGAAATATA CAGTGTATGT GCCGACGATG CACATGGTAC GCCCGTTATG
CTCAAAGCCC AAGAGCTAGG TATTACGCCA GAGGAAATGG TGGCGCGTAC CCGTGAAGAG
CATCATCAAG ATTTGCTCGA CTTCTTCGTA GAATATGACA ACTACCACGT TACCCACAGT
GACGAAAACA AAGAGCTGTC TGAACTGATT TACAACCGCT TAAACGATGC GGGATATATT
TCAAAGCGCA CTATCAGCCA GTTGTTTGAC CCTGAAAAGA ACATGTTTTT GCCGGATCGC
TTTGTAAAAG GCACTTGCCC TAGCTGTGGT GCTGAAGATC AAAACGGCGA TAGCTGTGAT
AACTGCGGTG CGACTTACGA CCCCACAGAA ATGAAGAACC CACGCTCAGT GGTTTCAGGC
GCGACGCCGA TTTTAAAAGA CTCAGAGCAT TTCTTCTTCG ACTTACCGCA ATTTTCAGAC
ATGCTGCAAA ACTGGCTGAA AAGCGATGCC TTGCAAAGCG AAATCAGCAA CAAGCTTGAA
GAATGGTTTG AAAAAGGCCT ACAACAGTGG GATATCAGTC GCGACGCACC TTACTTCGGG
TTTGAAATTC CCGGTGCACC CAACAAATTC TTTTATGTAT GGGTTGATGC ACCCGTCGGG
TACATGGCGA GCTTTAAAAA CTTGTGTGAT CGCAGCGGCA TTAACTTCGA TGAATACTGG
GGCGCTGACT CTGACGCTGA GCTATACCAT TTTATCGGTA AAGACATTAC CTATTTTCAC
TGTCTATTCT GGCCAGCCAT GCTTGAAGGC GCCGGTTTCA GAAAGCCTAC GGGCGTTAAC
GTGCACGGTT TTGTCACCGT TAACGGTGCC AAAATGTCTA AGTCAAAAGG TACTTTTATT
AAGGGCCGGA CTTATTTAGA ACATTTAAAC CCCGAGTATC TGCGTTATTA CTTCGCCTCT
AAACTGGGCG CGAACGTGAC AGATATCGAC CTTAACTTTG AAGATTTCGC ACAGAAAGTT
AATTCAGACT TAGTAGGCAA AGTCGTTAAC ATCGCCAGTC GTTGTGCCAG CTTTATCACC
AAGCGTTTCG ACGGCAAGCT GTCAGACAAC GTGCTTGAGC CTGCGTTAGT AGCTGAATTT
CAACATGCAC AAGCGAGCAT CGCCCAAGCA TTTGAAGAGC GCCAATATCA CAAAGCCATT
CGCGAAATTA TGGCACTAGC GGACAAAGCT AATCAGTTCA TTGATGCCAA CGCCCCTTGG
GTCACCATCA AAGATGAAAG TAAACAAGCC TTCACTCACG ATGTATGTTC ATTGGGTATA
AACTTGTTCC GCCTGTTAAT GGTGTATTTA AAACCCGTTG TGCCCAAATT AGCCGAGCAA
GCCGAAGCCT TCTTGAACGA TGATTTAAGC TGGAGCAGCG CCCAAAGTGT ACTAACTGGC
CATGAAATCA ATAAATTCAA AGCATTAATG CAACGAGTAG ATATGGACAA GGTGAACGCC
ATGGTGGATG ACTCAAAAGA AAACCTAGCA CCGACGGTAA CGCTAGACCC AAACAGCCCG
TTGGCGAAAG ACCCTATCAG TGACACGATC GAGTTTGATG ACTTCGCTAA AATAGACCTG
CGTATTGCTA AAATAGTGGT CGCTGAGCAC GTCGAAAAAG CGGACAAGTT ATTGCGTTTA
GAGCTTGATT TAGGCGGTGA GACCCGCCAA GTATTCGCAG GCATTAAATC TGCTTACCAA
CCAGAAGATT TGGTGGGTAA GTTAACGGTT ATGGTGGCAA ACCTAGCGCC GCGTAAAATG
CGTTTTGGCA TGTCTGAAGG CATGGTGCTA GCAGCAGGTC CTGGCGGCAA AGACTTGTGG
ATCATGGAGC CACACGAAGG CGCACAACCT GGCATGAAAG TGAAGTAA
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| Protein sequence | MSSQPRKILV TSALPYANGS IHLGHLLEHI QTDIWTRFQR MCGHEIYSVC ADDAHGTPVM
LKAQELGITP EEMVARTREE HHQDLLDFFV EYDNYHVTHS DENKELSELI YNRLNDAGYI
SKRTISQLFD PEKNMFLPDR FVKGTCPSCG AEDQNGDSCD NCGATYDPTE MKNPRSVVSG
ATPILKDSEH FFFDLPQFSD MLQNWLKSDA LQSEISNKLE EWFEKGLQQW DISRDAPYFG
FEIPGAPNKF FYVWVDAPVG YMASFKNLCD RSGINFDEYW GADSDAELYH FIGKDITYFH
CLFWPAMLEG AGFRKPTGVN VHGFVTVNGA KMSKSKGTFI KGRTYLEHLN PEYLRYYFAS
KLGANVTDID LNFEDFAQKV NSDLVGKVVN IASRCASFIT KRFDGKLSDN VLEPALVAEF
QHAQASIAQA FEERQYHKAI REIMALADKA NQFIDANAPW VTIKDESKQA FTHDVCSLGI
NLFRLLMVYL KPVVPKLAEQ AEAFLNDDLS WSSAQSVLTG HEINKFKALM QRVDMDKVNA
MVDDSKENLA PTVTLDPNSP LAKDPISDTI EFDDFAKIDL RIAKIVVAEH VEKADKLLRL
ELDLGGETRQ VFAGIKSAYQ PEDLVGKLTV MVANLAPRKM RFGMSEGMVL AAGPGGKDLW
IMEPHEGAQP GMKVK
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