| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1884 |
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| Symbol | |
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| ID | 4173069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2278396 |
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| End bp | 2279769 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054893 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_661458 |
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| Protein GI | 109898203 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATGGT ATTCTATCCT GCCGCCGATT ATCGCAATCG TGGTGGTTTT TTGGCGCAAA
GAAGTCATCT TGGCATTGAT TCTCGCCATT TTCTCAGCTG AAGCATTGCT GGCCTATCGA
AACGGTAGTG AGTTTTTATT CAACGGCATT ATTGGCTCCA TTGAGCGAGT CATTGAAATA
GCGAGTTCCG CTGGTAATAC ACGCATTCTC ATATTCAGTG TGTTAATTGG TGCTTTGCTA
GCCTATATAC GTAACTCGGG TGGGGTAACC GCAACAGTTG AAATGTTGAT CAATAAAGGC
GTGGCTAAAA GTAAGCGGCA AGTGGGTTTG TTGACAATGT TTACTGGCAT AGTAGTGTTT
ATTGAGTCCA ACTTGAGTGT ATTAGCGTCG GGCATTTTAT CTCGCGGATT ATACGATAAA
TTTAAAATGA GTCGCGCACG GTTAGCGTAT GTTATCGACA GTACCAGCGC ACCTGTTTGT
ATCTTAATTT TACTTAATGG CTGGGGGGCG TTTGTTCTTG GCTTATTAAG TAATTACGAA
TTAGAAGAGT CTCCAGTCTC CATTTTATGG GGCACTATTC CGTTTAATTT CTACGCTATT
ATTGCGTTAC TTATCGTCAC CTACACTATC GTCACAGATA AAGTACACGG GCCCTTGCGC
GAAGCCGAGC GCGAGATGCA GCAGAATAAC GATGTCAGTT TGCCCATCCC CCCTAGTAAA
GCGCGGTTCA TGCTTGTTCC TCTTGGTACC ATGATATTCG GTATGATTGG CTTTATGTTG
TGGACGGGGG ATGGAGATAT TGCCGCAGGA AGCGGTAGCA AATCTGTGCT GTATGCAACT
GTGCTGGCGT GTATGGTCGC GTATTTATTA TTAATAAGCG CTAAAAAATA CACCCATAAA
GAATTGGTAG ACGAAGGGTT CAAAGGGATG GGTGAAATTT TACCACTAGT GACTATTGTG
CTGTTTTCAC TGACGTTGGG CGGCAGCCTC AAAGAACTGG GAACAGGCAT TTTTGTCGCT
AATTTAGTGG GTGATTATTT GCCACTGTCA TTGATAGTTC CTGTGCTGTT TTTAGCGGGA
GGGATCATGT CTTTCACCAC GGGAACAAGT TGGGGTACTT TCGCCATTCT TATTCCTATT
GGTGTGCCAC TGATTCAAAC CTTAGGTTTA CCCCCTTCGC TAGTGCTTGC CGCAATTTTA
GGCGGCGGGG TATTTGGCGA TCACTGTTCG CCGATATCTG ACACCACAGC CGTATCGTCG
ATTGCATCAG GGTGTGATTT GCTCACGCAC GTTCGTACAC AAATGCCCTA CGCCTTATTT
GGCGGAGCCT TGGCATTTAT TGCGTACTTT ATTGCTAGCT TGATCATGCT ATAA
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| Protein sequence | MEWYSILPPI IAIVVVFWRK EVILALILAI FSAEALLAYR NGSEFLFNGI IGSIERVIEI
ASSAGNTRIL IFSVLIGALL AYIRNSGGVT ATVEMLINKG VAKSKRQVGL LTMFTGIVVF
IESNLSVLAS GILSRGLYDK FKMSRARLAY VIDSTSAPVC ILILLNGWGA FVLGLLSNYE
LEESPVSILW GTIPFNFYAI IALLIVTYTI VTDKVHGPLR EAEREMQQNN DVSLPIPPSK
ARFMLVPLGT MIFGMIGFML WTGDGDIAAG SGSKSVLYAT VLACMVAYLL LISAKKYTHK
ELVDEGFKGM GEILPLVTIV LFSLTLGGSL KELGTGIFVA NLVGDYLPLS LIVPVLFLAG
GIMSFTTGTS WGTFAILIPI GVPLIQTLGL PPSLVLAAIL GGGVFGDHCS PISDTTAVSS
IASGCDLLTH VRTQMPYALF GGALAFIAYF IASLIML
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