| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1876 |
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| Symbol | |
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| ID | 4173061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2271868 |
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| End bp | 2272224 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638054885 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_661450 |
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| Protein GI | 109898195 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.345927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATAA ATCTTTCAGG TCACCATGTA GAATTAAGCG ATACCGTAAA AGAACATGTA
AACGAAAAAT TTTCTAAGCT AGCCAGCCAT TTTCCAACTT TAATCGCCCT TGATATCATT
ATTTCCAAAG AGCATGGCGA GTTCGATGTA GAAATCAGCA CCCAATATGA GGGCTCACGT
ATTTCGGCCT CAGCAGAGAA TCCGGTTATG TATCCTGCTA TTTCTAAGGC AGCCAAAAAG
CTAGATGCTG CGCTCAAGCA CCGCAAAGGT CAGTTGAAAG GGGATTTACA CAAAAAACCT
GAGTGCACCA CCCCTGATAT CGCCCATGAA ATTATTCAAG AGATGGATTT GCGTTAA
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| Protein sequence | MKINLSGHHV ELSDTVKEHV NEKFSKLASH FPTLIALDII ISKEHGEFDV EISTQYEGSR
ISASAENPVM YPAISKAAKK LDAALKHRKG QLKGDLHKKP ECTTPDIAHE IIQEMDLR
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