Gene Patl_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1873 
Symbol 
ID4173058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2266877 
End bp2268955 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content43% 
IMG OID638054882 
ProductFMN-binding 
Protein accessionYP_661447 
Protein GI109898192 
COG category[K] Transcription 
COG ID[COG3901] Regulator of nitric oxide reductase transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAT CTTACCAACT GAATTACCTA GCCTTGATTA TTGGCACATT GTTGACCCTT 
TTTTCATTGG TCAGTCACGC CGATACTGTT CCGGCGAACA TCGCACATAT ATTTCCAAGC
GCAACCCGGA TCGAGGCCCC CCTTGAGGAT GTTGCTGTTA CGCCTGTATA CCAATTGAAC
GAGTTACTTG GCTATACCTT TGAATCTGAC GATTTCACAC AATTCATTGG TTTTTCGGGG
CAAACAATCA ACCTTCTCAT CGGTTTGGAT ACCAAAGGTA TCATCACTGG TATTAAGGTC
CTTAATCATA ATGAACCGAT TTTTTTGCAT GGCCTAGGCG AAGAAGCCAT GTTCAGTTTT
ATCGCACAAT ACCCTGGGCA CTCAATCAAA GAACGTTTCA TCATCAATAG CCGTGAACAA
CACTCGGCTG ATAATACCTA CTTTGATGGC GTGACCCGAG CGACAATTTC CGTTCTTGTT
ATCAATGACA CCATCATCGC ATCGGCGCTT AAAGTCGCTA GGCAAAAACT TGACGGATTT
CTAGCGGCGC ATCCTCATCA AATTAAGCAA GATTTCTATC ATCCATTGAC CTTTAAACAA
CTGCTCGAAA AAAAGTATAT CCATCATTGG GTGGTAAGCA CCAAAGAGGC AATGAACATT
TCCCCCAAGT TAGCGCAGAA AGTGAAACGC TTAGCGGATG GCCACGATGA CTTTATTGAT
ATCTACGTGG CGTTCGTCAA CATCCCTATG ATTGGCAGAA ACCTGTTGGG CGACCAAGAA
TATAAGCGAC TTATAGAAGA GCTGTCGCCC GGCGAGCACG CGTTAATGCT ATTCAATAAA
GGACAATACT CCTTTATCAG TGAAGAGTTT ATTCCCCAAA CAACCTCGAG CCGGTTAAAC
GCTGAGCAAG GTGGGTTTCC GGTAGACGTT CGAGATATAG ATTTTTACAG CTTCTACCCA
CCAAGCTTTG CTATGCAGTT ACCAAAGTTT GATGATCAGC GTGTGTTCCG CATTAAATCT
CAATCTGGAT TTGATATAAG CCAACCATTC AATTTGAACT TATCAGTAAG CTATCACTCG
TCCTTCTTGA ATCAACAAGA GCATGCATTT CCTTTTACGA TCACCCCAAA CCCAGACTTG
TTTGAAGAAA CACCTGATGC TTTAAGTCAA GTCAGTCAGC GTCCATTATG GCAGAAAATA
TGGTTAGATC GCCCGGTGCA AATTGGTCTC ACCCTGCTCT ATCTACTGTT CGTTTTATGG
GTGTTCGTCA CGCAACACTC CCTAGCGAAA AGCCAAACCA AAGTACATCG ACTGCGTTTT
GCCAGTTTAA TATTTGTATT ATTTTTTGTC GGTTTCTACG CCCAAGGCCA ACTCTCCGTG
GTGAATATAT ACACCCTACT CCTTGCCCTA GGAAGCGACT TTAATATTAC GGTTTTCCTG
CTCGACCCGG TTATTTTTAT CTTATGGGTG TTTGTGTTTG TAACCCTATT TTTATGGGGT
CGGGGGGTGT TTTGCGGCTG GCTATGCCCT TTTGGCGCAC TGCAAGAATT TATGGGCATG
CTGGCAATTA GGCTGCGTAT TCGCCAACTA AAAATTTCAC CGAGACATCA CAAGTTTGCC
CAAAAGATAA AATACTTAGT GCTTCTCGGG CTAGTGGCAT GTTCATTCTA TTCCCTGACA
TTGGCAGAAA AGCTAGCCGA AATTGAGCCA TTTAAAACAT CAATTACATT GAATTTCGTG
CGCTACTGGC CTTTCGTTCT TTATGCTCTG GTATTGCTGG CTCTGAGTTT AAAGATTCAC
AAAGTGTACT GTCGCTATTT ATGCCCATTA GGTGCTGGCT TAGCAGTACT AGGACGTTAC
CCGTTGTTTA AGTGGCTAAC GCGCCGCAAA GAATGTGGTA GCCCTTGTCA GCTTTGTCGC
AATAAAAAAT GTGCGATCGA CGCCATAAGA CCCACTGGTA ACATTGATTA TAATGAATGT
ATTCAATGCC TTGAGTGTCT TGTTACCATT GAGAGTCCGC AACTATGTGT GGTGGACAAA
TACAATAAAA AATCAATAAG AGTACGAGAA GTAAAATAA
 
Protein sequence
MRLSYQLNYL ALIIGTLLTL FSLVSHADTV PANIAHIFPS ATRIEAPLED VAVTPVYQLN 
ELLGYTFESD DFTQFIGFSG QTINLLIGLD TKGIITGIKV LNHNEPIFLH GLGEEAMFSF
IAQYPGHSIK ERFIINSREQ HSADNTYFDG VTRATISVLV INDTIIASAL KVARQKLDGF
LAAHPHQIKQ DFYHPLTFKQ LLEKKYIHHW VVSTKEAMNI SPKLAQKVKR LADGHDDFID
IYVAFVNIPM IGRNLLGDQE YKRLIEELSP GEHALMLFNK GQYSFISEEF IPQTTSSRLN
AEQGGFPVDV RDIDFYSFYP PSFAMQLPKF DDQRVFRIKS QSGFDISQPF NLNLSVSYHS
SFLNQQEHAF PFTITPNPDL FEETPDALSQ VSQRPLWQKI WLDRPVQIGL TLLYLLFVLW
VFVTQHSLAK SQTKVHRLRF ASLIFVLFFV GFYAQGQLSV VNIYTLLLAL GSDFNITVFL
LDPVIFILWV FVFVTLFLWG RGVFCGWLCP FGALQEFMGM LAIRLRIRQL KISPRHHKFA
QKIKYLVLLG LVACSFYSLT LAEKLAEIEP FKTSITLNFV RYWPFVLYAL VLLALSLKIH
KVYCRYLCPL GAGLAVLGRY PLFKWLTRRK ECGSPCQLCR NKKCAIDAIR PTGNIDYNEC
IQCLECLVTI ESPQLCVVDK YNKKSIRVRE VK