| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1860 |
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| Symbol | |
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| ID | 4173045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2249897 |
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| End bp | 2250754 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054869 |
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| Product | ABC transporter related |
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| Protein accession | YP_661434 |
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| Protein GI | 109898179 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGC CATCAGACGC GAAGCTTAAC CCGGTTGGGC AAAAAATTTC GAACAACAAC
CAACCCAGTC ATAAAATAAC CCACTCCAGT ATCGAGGTGC GAAATTTGTC ATACCGCTAT
GGCAAAAAGC GCGTGCTTGA TTGCGTGAAT TTAACCCTAC CACAGGGTAT CAATATTCTG
CTTGGACCAA ACGGTGCGGG TAAAAGTACC TTATTTTCTT TGCTTACCGG TTTAAAGTCT
GCCCCGGGAG CTAACGCAAG CGCCAACAAA CGCCTTGCTG ACCATGAGGC CAATAGTGAC
ATCAAAGTAT GTGGTTTGAG CCTGCAAAGC GCCCGCAAGG ACATCATGCG GTCAATGGGA
GTGGTGTTTC AACAAAACAC CTTGGACCTA GATTTAACCG TTCAACAAAA CTTGTTGTAC
CACGCATCGC TGCACGGTAT TTCGTCGGCG AATGCTCTGA GTAATATTGG TGACATACTG
TTGGGGTTAT CCCTCAATGA CAAGCTGGCT GTGAAAGTCA GAGCCTTGAA TGGGGGCCAT
CGCCGGCGGG TAGAAATAGC CCGAGCCCTG TTACATCAGC CTAAGGTACT ATTACTTGAT
GAACCTACCG TAGGGCTTGA TATAGAGAGC CGCGCGCTGA TCATCAAATA CGTGCGCACC
TTAACCCAGC GACAAGGCCT TTGTGTGTTG TGGGCGACGC ATCTGATGGA TGAAGTCAGT
GCACAAGACA GCTTGGTTGT GCTTAATAGT GGGCAAGTTA AAGCGCAAGG GGTTACCCGA
GATTTATGTG CCCAATTCGA TGTCGATGAT GTGCCTCAGC TTTACCGTAC GTTAACCGCC
AGCATGGAGG CACTATGA
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| Protein sequence | MNKPSDAKLN PVGQKISNNN QPSHKITHSS IEVRNLSYRY GKKRVLDCVN LTLPQGINIL
LGPNGAGKST LFSLLTGLKS APGANASANK RLADHEANSD IKVCGLSLQS ARKDIMRSMG
VVFQQNTLDL DLTVQQNLLY HASLHGISSA NALSNIGDIL LGLSLNDKLA VKVRALNGGH
RRRVEIARAL LHQPKVLLLD EPTVGLDIES RALIIKYVRT LTQRQGLCVL WATHLMDEVS
AQDSLVVLNS GQVKAQGVTR DLCAQFDVDD VPQLYRTLTA SMEAL
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