| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1856 |
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| Symbol | |
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| ID | 4173041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2246056 |
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| End bp | 2246940 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054865 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_661430 |
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| Protein GI | 109898175 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACCCA GTAAAACCTT ACATCGGGTT ATATGGGCGG CTTACGCGCT GTTTATCTGC
CAAACAAGTC TGGCCCGCCC TTTCGATGAC ATCATACAAA CCGACTTTAT CACGGTAGCG
GTTTATCGCG ATTTCGTGCC TTTTTCGTTT CAACAAAATG GCCAAGATCT GGGCATTGAT
GTGGAAATAG CCAAGCATAT TGCCCAGCAA CTAGGCGTAA AGCTCAAGTT AAAATGGGCC
ACTGCGGATG AGTCCGTAGA AGATGACCTG CGAAATAATA TCTGGAAGGG GCATTTCCTC
GATCGCACCG TGGCAGACCT AATGCTGCGG GTCCCCTACG ATAAAAAATA CAGCTTGAAA
CGCGATGACA TAGGTGAATT GGTGAACGGC CAAGTGCATA TGTTTGCGCC TTACCACGTG
GAATCTTGGC AGATAGTGTT TGATCAATCA GCGATTGAGT CTGTGCCAAC AATTGCGGTT
TTCCAATACC ACGATATAGG CGTTGAAAAC GATTCTATCC CTCAGTTTTA TTTGATGTCA
GCCTTTGCTG GCCGCATGCG CGACAGAAGC AAGCAATTTG TCACCATCCC TTTGGCGATA
CAAGCAATGC AAGCAAAAGA AGTGGATGCT GTGATGGGCA TGCGCAGTCA AATCAGTTAC
TACCAAAGCC ATTTAAACAA CCAGCGCTAT CCTTTGGCAC AAAACGGTTT CCCGAATATT
GGCAAACAAA AGTGGGACAT CGGCATGGCC GTCAAGGCGG ATTATCGCCA GTTGGGTTAT
GCCATAGGCG ATATTGTTGA GCAAATGACG AAAGACGGCA GCATGAGAAA AATATTTGAG
GATTACCAGA TTACATATGA AATCCCTGAA TATTACTCTC CCTGA
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| Protein sequence | MTPSKTLHRV IWAAYALFIC QTSLARPFDD IIQTDFITVA VYRDFVPFSF QQNGQDLGID
VEIAKHIAQQ LGVKLKLKWA TADESVEDDL RNNIWKGHFL DRTVADLMLR VPYDKKYSLK
RDDIGELVNG QVHMFAPYHV ESWQIVFDQS AIESVPTIAV FQYHDIGVEN DSIPQFYLMS
AFAGRMRDRS KQFVTIPLAI QAMQAKEVDA VMGMRSQISY YQSHLNNQRY PLAQNGFPNI
GKQKWDIGMA VKADYRQLGY AIGDIVEQMT KDGSMRKIFE DYQITYEIPE YYSP
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