Gene Patl_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1853 
Symbol 
ID4173038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2242955 
End bp2243422 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content42% 
IMG OID638054862 
Producthypothetical protein 
Protein accessionYP_661427 
Protein GI109898172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTAG CCCAATTAAA TATTGCCACC ACTTTATACC CAATTGACGC ACCTGAAATG 
GCTGATTTTG TGAATAATTT AGCGCCTATT AATGCCATAG CAGAGGCAAG CGCAGGTTTT
ATTTGGCGCT TACAAGATGA CAGCGGAGAT GCCACGCACA TCCATGCTTT TGATGATCCG
AACATGATTG TGAATATGTC AGTGTGGGAA TCAATTGATG CCTTAAAGGC TTTTATGTTT
AAGACACATC ACAGAGATTT TATGCGCCGT AAAAAAGAAT GGTTTCAACA CAGTGACGTA
GACACCTATG TGTTGTGGTG GATCCCACAA GGACATACGC CCAGCCTTGA TGAAGCTATC
AGCAAGCTTA CTCTTTTGCG CGATAACAGT GAATCGCCCA GTGCATTCAC ATTCAAACGT
CAATTCAGTG AAGATGAATT TCTCTCACTT AATCAACATG CCATGTAA
 
Protein sequence
MPLAQLNIAT TLYPIDAPEM ADFVNNLAPI NAIAEASAGF IWRLQDDSGD ATHIHAFDDP 
NMIVNMSVWE SIDALKAFMF KTHHRDFMRR KKEWFQHSDV DTYVLWWIPQ GHTPSLDEAI
SKLTLLRDNS ESPSAFTFKR QFSEDEFLSL NQHAM