Gene Patl_1846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1846 
Symbol 
ID4173031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2235002 
End bp2236210 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content48% 
IMG OID638054855 
Producttransposase, IS4 
Protein accessionYP_661420 
Protein GI109898165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.79186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGATA TTCATATCTT ACACGATTTG CTTAAAAAAC AATGCCCTAA TCTACATGCC 
AAACGTCTTT CCGCTTTGAT GGTTGCCACC CAATCTTTGC TAGATGGCCA GCAACTATCG
TTGACCGAAT TAGGACGCAA TATCTCAGGC TCCGTGGCCC CGAAACACAA CATTAAACGC
ATCGACAGGC TGCTTGGTAA TAACAACCTA CATAATGAAC GGCTCGACAT CTATCGTTGG
CACGCTCGCT TGCTTTGCGG TGCTAACCCC ATGCCGGTTG TCCTTGTGGA TTGGTCTGAT
GTGCGTGAGC AGCTCAGGCA TTTAACCTTA CGTGCATCGG TCAGTGTTCA GGGGCGCTCT
GTCACGCTTT ATGAGCGCGT ATTTTCATTC GGTGAATACA ATTCACCTGT TAGTCATAAT
CCGTTTTTAC GGGAGTTGGC GAGTATCCTG CCGTCGGGTT GTTGCCCGTT GATTGTGACC
GATGCAGGCT ATCGTAACCC TTGGTTTCGT GAAGTCGAAA AGCATGGATG GTTCTGGCTA
GGCCGAGTGC GCGGTGATGT GGGATTTAAG CGTGATGGGC AAGCATCATG GCAAAGTAAT
AAGTCGTTTT ATCCCAGTGC AAATTCTCGG GCCAAATACC TTGGGTGTGG GCAATTAGGG
CGTAAAAGCC CGCTTCATGC ACACCTGCAT TTGTACAAAG CAAAGGCCAA ACATCGAAAG
GACAACCGCT CTTCAAAGGC AGGTCGAAAC CACACCGCCC AGCAAAGCTA TCGTGCCGGT
AGCAAAGAGC CTTGGCTACT CGCCACTAAC CTTCCCGAGA ACGATAAACT TAACTCAAAA
CAGCTGGTTT CTCTTTACGC AAGACGGATG CAAATAGAAG AAACCTTCCG CGATATTAAA
AGCCCTCAAT ACGGAATGGG ACTGCGCCAC AGCAACAGTC GCTGTACCAA ACGATTCGAC
ATATTACTGC TGATAGCGAT GCTCGCAGAA TGGCTATTAC GGTTACTCGG TATCATTGCT
CAAAAACAAA ATTGGGAAAG AGCATTTCAA GCTAACACCA TCCGTCATCG GCGCGTGTTA
TCTATCATTA GGCTAGGCAG AGAAGTCAGG AAAAGGGCAA AAGATTACAG GATGAACTCA
GCCCAAATGA CATGGGCTAT CGCCCAATAT ATTACCTGGG TTCACAAAGA AGGAAGACCA
ATTCTATGA
 
Protein sequence
MRDIHILHDL LKKQCPNLHA KRLSALMVAT QSLLDGQQLS LTELGRNISG SVAPKHNIKR 
IDRLLGNNNL HNERLDIYRW HARLLCGANP MPVVLVDWSD VREQLRHLTL RASVSVQGRS
VTLYERVFSF GEYNSPVSHN PFLRELASIL PSGCCPLIVT DAGYRNPWFR EVEKHGWFWL
GRVRGDVGFK RDGQASWQSN KSFYPSANSR AKYLGCGQLG RKSPLHAHLH LYKAKAKHRK
DNRSSKAGRN HTAQQSYRAG SKEPWLLATN LPENDKLNSK QLVSLYARRM QIEETFRDIK
SPQYGMGLRH SNSRCTKRFD ILLLIAMLAE WLLRLLGIIA QKQNWERAFQ ANTIRHRRVL
SIIRLGREVR KRAKDYRMNS AQMTWAIAQY ITWVHKEGRP IL