| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1839 |
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| Symbol | |
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| ID | 4173024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2222670 |
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| End bp | 2225138 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638054848 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_661413 |
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| Protein GI | 109898158 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.351475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTGGTG CGCGCGTACA CAACCTAAAG AATGTGAGTC TTGATATACC ACGTAACGCC
TTGGTGGTGT TTACCGGCAT TTCAGGCTCA GGTAAATCCT CGCTGGCATT TGGTACATTG
TTTGCTGAAT CTCAACGACG TTACCTAGAC TCGGTTTCAC CGTATGCACG AAGACTAATT
GATCAGGTAG AAGAGCCTGA TGTTGACGCT ATTGATGGCT TGCCGCCCGC TGTTGCCCTG
CAGCAGCAAA GAGGCACGCC TTCAGTGCGT TCTTCTGTTG GCAGTGTTAC CACCATATCA
AATGGCCTAC GGATGCTTTA TTCCCGCGCG GGTGATTACC CCGTTGGTCA ATCTATTTTA
TACGCTGACT CATTTTCGCC AAATACCGCC CAAGGCGCTT GCCCCAAATG CCATGGCATC
GGGCGTGTTT TCGATGTGAC CGAAGCACTA TTGGTGCCTG ACGACAGTAA AACCATACGA
GACAAAGCAA TTGCCGCGTG GCCTCCTGCA TGGCAAGGGG CCAATTTAAG CCGAATTCTG
GTCTCTCTTG GCTACGACAT CGATACCCCA TGGCGGGACT TGCCTAAAAA AGCCAGGCAG
TGGATTTTAT TCACCGATGA AACCCCCACA GTGCCAGTCT ATCCTGAGTA CAATTTAGCC
CAGACTCAAG CCGCCATTGA AAATGGCGAA GCGCCCAGCT ATATGGGCAC GTTCACCAGC
GCCCAGCGCT TTGTTTTACA CTCTTTTGCC ACGACGCAAA GTCCGCGTAC GAAAAAGCGC
GTATCGCAGT TTATGCAGAT TTCACAGTGC CCCGAGTGTG AAGGTAAGAA GCTCAAGCGG
GCGTCATTAT CGGTCACCTT TACGGGTTTG GATATTGGAC AGTTATCGCA ATTAACCTTA
ACGGACTTGG CCGAAAGATT ACGTGCAACA GCGCGTACCA AACCCAGTGA TGAATTACAG
GACAGAGAAA AGATCATCGT GGCTCAGCGC TTAGCCAGTG ATATTTTAGC GAGAGTTGAG
GCTCTAACGC ATCTTGGTCT TGGCTATTTA TCACTGGAGC GAAGCACTAC TACACTTTCG
CCGGGGGAAT TGCAGCGTTT GCGCTTGGCA ACACAAATCC GCTCCCAGCT ATTTGGTGTG
GTTTATGTAC TAGATGAGCC ATCCGCTGGA CTGCATCCAG CCGATAAAAA GGCGCTACTG
GCGGCTCTTG ATGAATTGAT TACGGCGGGT AATTCAGTGT TTATGGTCGA GCATGATGTG
AGTGTTATTC GCCATGCTGA TTGGATAGTC GATGTAGGGC CGGATGCAGG GACGCATGGC
GGCGACATTA TTTATAACGG CCCAGTTGAA GGACTCGAAG GTAATTTACG CTCGCATACG
GCTAAGCATT TGTTCGAACA GTCAGTGGGT GAGGAGCGTA CACCACGCGA GGCAAAGGCG
TGGTTAAAGC TTGCTTCAAT CGAGCGAAAT AATTTGCAAG GCATCGACGT GGCGTTTCCT
TTAGGCGTGA TGACAACAGT GACGGGGGTG TCTGGCTCGG GCAAATCAAG TTTAGTCAGT
CAAGCATTGG TTGAGCTGGT GAATGAGGCC TTAGGCGTAA AGAAAACCGT TGATGTGCCA
ACTGATGAAG CCGATTTGCT GGAACAAGAA ACCCAGACGA GCACAGGTGG GCATATTGTT
GACGGCCTAG CGCACGTGAA ACGCTTAATA ACGGTAGATC AAAAGCCCAT AGGCAGAACA
CCGCGCTCCA ATTTAGCGAC TTACACTGGG TTATTTGATC ACGTCCGTAC CTTGTTTGCC
AACACCGATG AGTCGAAAAA AAGACGTTAC GACGCAGGTC GCTTTTCGTT CAATGTCACC
AAAGGCCGCT GCAGTAATTG CGACGGGGTG GGGTTTGTGA GTGTTGAGTT GCTCTTCTTA
CCTAGTGTTT ATTCACCTTG CCCGGTCTGC CAAGGTCGTC GCTATAACGA CAAAACCTTA
GAAATTACGT ATCGCGACAA AAACATTGCT GATGTGCTGG ATTTGACGGT CGAGGCAGCC
CACACATTTT TTGCGGGTCA GCCGCCCGTG CTTCGAGCAT TAGATGCGTT ACTCAAAGTA
GGGCTGGGGT ACTTACGCCT TGGCCAACCT GCCACGGAGC TATCAGGCGG TGAAGCTCAG
CGTATCAAAC TAGCCACTGA GCTACAGCGA GTACAAAAAG GTGACACGCT GTACGTCTTA
GATGAGCCCA CCACAGGCTT ACATCCAAAA GATGTTGCTA TGTTGATGTC GCAATTAAAC
GGACTGGTGG ATGCCGGCAA CACGGTGATC ATGGTTGAGC ACGATATGCG TGTCGCCAGT
AGCAGTGATT GGGTCATTGA TATTGGCCCA GAAGCCGGTG ATAAGGGCGG GGCTGTGGTT
GCCCAAGGCG AACCGAAACA TGTCGCAATC AACAAGCAAA GTCGAACCGC GCCCTTTATG
TTTGTCTAA
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| Protein sequence | MRGARVHNLK NVSLDIPRNA LVVFTGISGS GKSSLAFGTL FAESQRRYLD SVSPYARRLI
DQVEEPDVDA IDGLPPAVAL QQQRGTPSVR SSVGSVTTIS NGLRMLYSRA GDYPVGQSIL
YADSFSPNTA QGACPKCHGI GRVFDVTEAL LVPDDSKTIR DKAIAAWPPA WQGANLSRIL
VSLGYDIDTP WRDLPKKARQ WILFTDETPT VPVYPEYNLA QTQAAIENGE APSYMGTFTS
AQRFVLHSFA TTQSPRTKKR VSQFMQISQC PECEGKKLKR ASLSVTFTGL DIGQLSQLTL
TDLAERLRAT ARTKPSDELQ DREKIIVAQR LASDILARVE ALTHLGLGYL SLERSTTTLS
PGELQRLRLA TQIRSQLFGV VYVLDEPSAG LHPADKKALL AALDELITAG NSVFMVEHDV
SVIRHADWIV DVGPDAGTHG GDIIYNGPVE GLEGNLRSHT AKHLFEQSVG EERTPREAKA
WLKLASIERN NLQGIDVAFP LGVMTTVTGV SGSGKSSLVS QALVELVNEA LGVKKTVDVP
TDEADLLEQE TQTSTGGHIV DGLAHVKRLI TVDQKPIGRT PRSNLATYTG LFDHVRTLFA
NTDESKKRRY DAGRFSFNVT KGRCSNCDGV GFVSVELLFL PSVYSPCPVC QGRRYNDKTL
EITYRDKNIA DVLDLTVEAA HTFFAGQPPV LRALDALLKV GLGYLRLGQP ATELSGGEAQ
RIKLATELQR VQKGDTLYVL DEPTTGLHPK DVAMLMSQLN GLVDAGNTVI MVEHDMRVAS
SSDWVIDIGP EAGDKGGAVV AQGEPKHVAI NKQSRTAPFM FV
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