| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1829 |
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| Symbol | |
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| ID | 4173014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2203878 |
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| End bp | 2204996 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054838 |
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| Product | alcohol dehydrogenase GroES-like protein |
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| Protein accession | YP_661403 |
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| Protein GI | 109898148 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0359093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCA TTAAAACTCG TGCGGCGGTT GCTTGGGCAG CCGGCGAACC ATTATCCATT
GAAGAAGTTG ATTTGATGCC GCCACAAAAA GGCGAAGTAC TTATTAAAGT CATCGCCACT
GGCGTATGTC ATACCGATGC CTACACGCTG TCGGGCGAAG ATCCGGAAGG CATCTTTCCT
GCTATTTTAG GCCATGAGGG CGCCGGGATT GTTGAAGCCA TTGGCGAAGG CGTGACGTCT
GTCGAAGTGG GCGATCATGT TATTCCGTTA TACACGCCAG AATGCGGCGA GTGTAAATTT
TGCTTGTCAG GAAAAACTAA CCTATGCCAA GCAATACGTG CCACACAGGG TAAAGGCTTA
ATGCCAGATG GCACCACACG TTTTTCAAAA AATGGCAAAC CTATTTATCA TTACATGGGC
ACATCTACCT TCGCGGAGCA CACAGTCGTG CCTGAAATTG CCTTAGCGAA AATCCCAAAA
GAAGCCCCTC TTGAAAAAGT ATGTTTACTT GGTTGCGGCG TCACCACGGG TATGGGCGCG
GTCACTAACA CCGCCAAAGT GCAAGAAGGC GACACGGTAG CGGTATTCGG TTTAGGCGGC
ATCGGTTTAT CTGTGCTAAT TGGCGCGAAA ATGGCCAACG CGGGTCGTAT CATCGCAATT
GATGTGAACG AAGATAAATT TAAAATTGCT AAGCAACTTG GCGCGACCGA TGTGGTGAAC
CCAAAAGATT TTGACAAATC CATTCAAGAA GTCATTGTGG ATATGACTGA TGGCGGCGTA
GATTACTCGT TTGAGTGCAT CGGCAATGTG AATGTGATGC GCTCAGCACT TGAATGTTGT
CATAAAGGCT GGGGCGAATC GGTGATCATT GGTGTGGCCG GTGCGGGCCA AGAAATCTCT
ACTCGACCGT TCCAACTTGT TACTGGTCGA GTATGGCGCG GTTCAGCATT TGGTGGTGTG
AAAGGTCGCA GCCAATTACC TGATTATGTA CAACGCTACA TGGATGGCGA ATTCGAGCTT
GATACCTTCA TTACCCACAC TATGCCACTA GAAGACATCA ATACGGCGTT TGATTTAATG
CACGAAGGGA AATCCATCCG CTCAGTGGTG CATTATTAA
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| Protein sequence | MQSIKTRAAV AWAAGEPLSI EEVDLMPPQK GEVLIKVIAT GVCHTDAYTL SGEDPEGIFP
AILGHEGAGI VEAIGEGVTS VEVGDHVIPL YTPECGECKF CLSGKTNLCQ AIRATQGKGL
MPDGTTRFSK NGKPIYHYMG TSTFAEHTVV PEIALAKIPK EAPLEKVCLL GCGVTTGMGA
VTNTAKVQEG DTVAVFGLGG IGLSVLIGAK MANAGRIIAI DVNEDKFKIA KQLGATDVVN
PKDFDKSIQE VIVDMTDGGV DYSFECIGNV NVMRSALECC HKGWGESVII GVAGAGQEIS
TRPFQLVTGR VWRGSAFGGV KGRSQLPDYV QRYMDGEFEL DTFITHTMPL EDINTAFDLM
HEGKSIRSVV HY
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